RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TULP3O75386 442 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PSIP1O75475 530 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 OR5F1O95221 314 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 OAS1P00973 400 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 HLA-DOAP06340 250 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 GPIP06744 558 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 MYL6BP14649 208 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CYP7A1P22680 504 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PSMB9P28065 219 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ALDH1B1P30837 517 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CAPGP40121 348 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 AP3M2P53677 418 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 RALGDSQ12967 914 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 GRM2Q14416 872 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 DMC1Q14565 340 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 MED1Q15648 1581 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 PSMD5Q16401 504 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 FXNQ16595 210 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ARSHQ5FYA8 562 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CLVS2Q5SYC1 327 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 AGAP9Q5VTM2 703 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ZNF425Q6IV72 752 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 C3orf33Q6P1S2 294 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ZNF517Q6ZMY9 492 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 DCDC5Q6ZRR9 648 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 DYMQ7RTS9 669 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 KRT26Q7Z3Y9 468 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 RETREG3Q86VR2 466 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 GRAMD2AQ8IUY3 354 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ADHFE1Q8IWW8 467 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 TBC1D21Q8IYX1 336 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PGAM4Q8N0Y7 254 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 C4orf33Q8N1A6 199 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 KRT78Q8N1N4 520 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 DEPDC4Q8N2C3 294 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 FITM2Q8N6M3 262 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CNTD1Q8N815 330 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 MARCH10Q8NA82 808 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 SLC4A11Q8NBS3 891 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 OR8H1Q8NGG4 311 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 C10orf82Q8WW14 230 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 TTC9Q92623 222 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PTPRUQ92729 1446 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 OTUB1Q96FW1 271 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 TEKT5Q96M29 485 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PAFAH2Q99487 392 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 MAP3K14Q99558 947 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 KCTD14Q9BQ13 255 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 PSD2Q9BQI7 771 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CADM1Q9BY67 442 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 ZC3H12CQ9C0D7 883 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 SPAG4Q9NPE6 437 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 NECTIN3Q9NQS3 549 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PCDHB16Q9NRJ7 776 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 EXD2Q9NVH0 621 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 INTS10Q9NVR2 710 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 ASNSD1Q9NWL6 643 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 TOR4AQ9NXH8 423 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 STK32BQ9NY57 414 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 NDUFAF4Q9P032 175 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CNOT8Q9UFF9 292 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 ZC3H7BQ9UGR2 993 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 FBXO40Q9UH90 709 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 GNEQ9Y223 722 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 PCDHB6Q9Y5E3 794 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PCDHGB3Q9Y5G1 929 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 ADGRF5Q8IZF2 1346 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 RGSL1A5PLK6 1076 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 C12orf71A8MTZ7 269 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 WDR64B1ANS9 1081 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 H3BMM5 538 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 STMND1H3BQB6 276 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 JRKO75564 520 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PLEKHA8P1O95397 391 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 STARD3NLO95772 234 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PAHP00439 452 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SAGP10523 405 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 HOXB1P14653 301 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 PON1P27169 355 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 TXKP42681 527 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CBX5P45973 191 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SLC1A6P48664 564 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 RPS3AP61247 264 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 KCNH2Q12809 1159 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 COTL1Q14019 142 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 PIGHQ14442 188 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 ZNF284Q2VY69 593 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ZC3H12BQ5HYM0 836 aaKnown RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 NDUFAF5Q5TEU4 345 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 TTBK2Q6IQ55 1244 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CNSTQ6PJW8 725 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 LAYNQ6UX15 382 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SLC30A10Q6XR72 485 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 CHST3Q7LGC8 479 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 DNAJB7Q7Z6W7 309 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 NLRP10Q86W26 655 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 SLC22A9Q8IVM8 553 aa2.25□□□□□ -2.05
USP53-202ENST00000450251 ZSCAN29Q8IWY8 852 aaPredicted RBP2.25□□□□□ -2.05
USP53-202ENST00000450251 THNSL1Q8IYQ7 743 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms