RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 CENPHQ9H3R5 247 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 FBRSL1Q9HCM7 1045 aaKnown RBP10.17□□□□□ -0.78
CCDC171-203ENST00000449575 GPATCH2LQ9NWQ4 482 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 THG1LQ9NWX6 298 aaKnown RBP10.17□□□□□ -0.78
CCDC171-203ENST00000449575 PCSK1NQ9UHG2 260 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 LSM7Q9UK45 103 aaKnown RBP10.17□□□□□ -0.78
CCDC171-203ENST00000449575 TMEM110-MUSTN1A8MSY1 372 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 FAM72CH0Y354 149 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 BUB1O43683 1085 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 ACSL4O60488 711 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 LRCH4O75427 683 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 PDGFBP01127 241 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-203ENST00000449575 PAX7P23759 505 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 IL1R2P27930 398 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 GBP1P32455 592 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 MS4A13Q5J8X5 152 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 FAM72AQ5TYM5 149 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 NUGGCQ68CJ6 796 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 FAM72DQ6L9T8 149 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 STRADAQ7RTN6 431 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 FAM72BQ86X60 149 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 CIR1Q86X95 450 aaPredicted RBP10.17□□□□□ -0.78
CCDC171-203ENST00000449575 CFAP52Q8N1V2 620 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 NAT16Q8N8M0 369 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 RNF217Q8TC41 542 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 P3H4Q92791 437 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 IRF7Q92985 503 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 CCDC114Q96M63 670 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 SPATS2LQ9NUQ6 558 aaKnown RBP10.17□□□□□ -0.78
CCDC171-203ENST00000449575 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC171-203ENST00000449575 ARHGEF38Q9NXL2 777 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 RRN3Q9NYV6 651 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 HS3ST4Q9Y661 456 aa10.17□□□□□ -0.78
CCDC171-203ENST00000449575 GFRA2O00451 464 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 TNFRSF8P28908 595 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 MIPP30301 263 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 LSP1P33241 339 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 GJA4P35212 333 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 SLC6A11P48066 632 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 RPS24P62847 133 aaKnown RBP10.16□□□□□ -0.78
CCDC171-203ENST00000449575 BIRC2Q13490 618 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 MESDQ14696 234 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 PPP2R5DQ14738 602 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 CA9Q16790 459 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 ADGRF1Q5T601 910 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 UNC45BQ8IWX7 931 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 FAM217AQ8IXS0 508 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 FNIP1Q8TF40 1166 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 RFFLQ8WZ73 363 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 CAVIN3Q969G5 261 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 PRMT1Q99873 361 aaKnown RBP10.16□□□□□ -0.78
CCDC171-203ENST00000449575 SH3GL3Q99963 347 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 SLC2A4RGQ9NR83 387 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 SPHK2Q9NRA0 654 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 CHD5Q8TDI0 1954 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 NEDD8-MDP1E9PL57 170 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 APOEP02649 317 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 KPNA1P52294 538 aaPredicted RBP10.16□□□□□ -0.78
CCDC171-203ENST00000449575 VAV2P52735 878 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 ZXDAP98168 799 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 SLMAPQ14BN4 828 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 SMTNL2Q2TAL5 461 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 ANO4Q32M45 955 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 ATP13A4Q4VNC1 1196 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 SLC44A4Q53GD3 710 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 KCNT1Q5JUK3 1230 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 FYB2Q5VWT5 728 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 ARFGAP2Q8N6H7 521 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 WFDC5Q8TCV5 224 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 IGSF8Q969P0 613 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 BTN2A3PQ96KV6 586 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 GDAP1L1Q96MZ0 367 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 EPHX3Q9H6B9 360 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 TBC1D14Q9P2M4 693 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 UVRAGQ9P2Y5 699 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 STOML2Q9UJZ1 356 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 INTUQ9ULD6 942 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 VANGL2Q9ULK5 521 aa10.16□□□□□ -0.78
CCDC171-203ENST00000449575 FAM107AO95990 144 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 F9P00740 461 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 ATP1A1P05023 1023 aaKnown RBP10.15□□□□□ -0.78
CCDC171-203ENST00000449575 ADRA1BP35368 520 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 TAS2R40P59535 323 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 PDGFRLQ15198 375 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 ITPRIPL2Q3MIP1 535 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 C10orf76Q5T2E6 689 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 AP1ARQ63HQ0 302 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 FBXL22Q6P050 247 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 ATP2A3Q93084 1043 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 BBS2Q9BXC9 721 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 DCLK3Q9C098 648 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 RABEP2Q9H5N1 569 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 MTF2Q9Y483 593 aaPredicted RBP10.15□□□□□ -0.78
CCDC171-203ENST00000449575 PIAS3Q9Y6X2 628 aa10.15□□□□□ -0.78
CCDC171-203ENST00000449575 DCXO43602 365 aa10.15□□□□□ -0.79
CCDC171-203ENST00000449575 BUB1BO60566 1050 aaPredicted RBP10.15□□□□□ -0.79
CCDC171-203ENST00000449575 IPO7O95373 1038 aaKnown RBP10.15□□□□□ -0.79
CCDC171-203ENST00000449575 MYBL2P10244 700 aa10.15□□□□□ -0.79
CCDC171-203ENST00000449575 TYRP14679 529 aa10.15□□□□□ -0.79
CCDC171-203ENST00000449575 TACR2P21452 398 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms