RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 SRPRAP08240 638 aaKnown RBP16.07■□□□□ 0.16
TRA2A-203ENST00000448549 SLC8A1P32418 973 aa16.07■□□□□ 0.16
TRA2A-203ENST00000448549 PPP1R2P41236 205 aa16.07■□□□□ 0.16
TRA2A-203ENST00000448549 ACADSBP45954 432 aa16.07■□□□□ 0.16
TRA2A-203ENST00000448549 SFSWAPQ12872 951 aaKnown RBP16.07■□□□□ 0.16
TRA2A-203ENST00000448549 ZC3H12AQ5D1E8 599 aaKnown RBP16.07■□□□□ 0.16
TRA2A-203ENST00000448549 RAP1GAP2Q684P5 730 aa16.07■□□□□ 0.16
TRA2A-203ENST00000448549 TRIM59Q8IWR1 403 aa16.07■□□□□ 0.16
TRA2A-203ENST00000448549 APCDD1Q8J025 514 aa16.07■□□□□ 0.16
TRA2A-203ENST00000448549 RPL10LQ96L21 214 aaKnown RBP16.07■□□□□ 0.16
TRA2A-203ENST00000448549 FAM129BQ96TA1 746 aa16.07■□□□□ 0.16
TRA2A-203ENST00000448549 SLC4A5Q9BY07 1137 aa16.07■□□□□ 0.16
TRA2A-203ENST00000448549 INTS2Q9H0H0 1204 aaKnown RBP16.07■□□□□ 0.16
TRA2A-203ENST00000448549 CNTN6Q9UQ52 1028 aa16.07■□□□□ 0.16
TRA2A-203ENST00000448549 CTNND2Q9UQB3 1225 aa16.07■□□□□ 0.16
TRA2A-203ENST00000448549 RAXQ9Y2V3 346 aa16.07■□□□□ 0.16
TRA2A-203ENST00000448549 FREM2Q5SZK8 3169 aa16.07■□□□□ 0.16
TRA2A-203ENST00000448549 EDDM13A0A1B0GTR0 161 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 BICDL2A1A5D9 508 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 TARSL2A2RTX5 802 aaKnown RBP16.06■□□□□ 0.16
TRA2A-203ENST00000448549 FAM149AA5PLN7 773 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 LRRC72A6NJI9 287 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 PAPSS1O43252 624 aaPredicted RBP16.06■□□□□ 0.16
TRA2A-203ENST00000448549 LETM1O95202 739 aaPredicted RBP16.06■□□□□ 0.16
TRA2A-203ENST00000448549 MOCS3O95396 460 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 APOEP02649 317 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 WNT1P04628 370 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 TACR2P21452 398 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 PSMD8P48556 350 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 NUMBP49757 651 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 STX17P56962 302 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 NUCB2P80303 420 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 ECT2LQ008S8 904 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 KCNJ12Q14500 433 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 RNF219Q5W0B1 726 aaPredicted RBP16.06■□□□□ 0.16
TRA2A-203ENST00000448549 BEND5Q7L4P6 421 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 CHSY1Q86X52 802 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 ELOA2Q8IYF1 753 aaPredicted RBP16.06■□□□□ 0.16
TRA2A-203ENST00000448549 STK40Q8N2I9 435 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 OR2T34Q8NGX1 318 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 STK32AQ8WU08 396 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 UBE2TQ9NPD8 197 aaPredicted RBP16.06■□□□□ 0.16
TRA2A-203ENST00000448549 ACP6Q9NPH0 428 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 TJP2Q9UDY2 1190 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 ADAMTS1Q9UHI8 967 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 CYTH4Q9UIA0 394 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 FZD4Q9ULV1 537 aa16.06■□□□□ 0.16
TRA2A-203ENST00000448549 A0A1B0GTQ1 180 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 TRABD2BA6NFA1 517 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 E5RJQ4 531 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 BIN1O00499 593 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 WNT9AO14904 365 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 DFNA5O60443 496 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 TRUB2O95900 331 aaKnown RBP16.05■□□□□ 0.16
TRA2A-203ENST00000448549 AFPP02771 609 aaKnown RBP16.05■□□□□ 0.16
TRA2A-203ENST00000448549 STK19P49842 368 aaPredicted RBP16.05■□□□□ 0.16
TRA2A-203ENST00000448549 YWHAZP63104 245 aaKnown RBP16.05■□□□□ 0.16
TRA2A-203ENST00000448549 PITX1P78337 314 aaPredicted RBP16.05■□□□□ 0.16
TRA2A-203ENST00000448549 MORC3Q14149 939 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 TAF5Q15542 800 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 COL28A1Q2UY09 1125 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 FOXR2Q6PJQ5 311 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 TMEM110Q86TL2 294 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 GATAD2AQ86YP4 633 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 GALNT15Q8N3T1 639 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 AADATQ8N5Z0 425 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 ZNF606Q8WXB4 792 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 PTPRN2Q92932 1015 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 BTN2A3PQ96KV6 586 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 ELF4Q99607 663 aaPredicted RBP16.05■□□□□ 0.16
TRA2A-203ENST00000448549 TRIM62Q9BVG3 475 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 POPDC2Q9HBU9 364 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 AASDHPPTQ9NRN7 309 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 FTSJ1Q9UET6 329 aa16.05■□□□□ 0.16
TRA2A-203ENST00000448549 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRA2A-203ENST00000448549 ITIH6Q6UXX5 1313 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 THAP12O43422 761 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 MED7O43513 233 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 GNA14O95837 355 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 IGLV3-25P01717 112 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 GOT1P17174 413 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 CD38P28907 300 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 CYP4F3Q08477 520 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 SMAD1Q15797 465 aaKnown RBP16.04■□□□□ 0.16
TRA2A-203ENST00000448549 INAVAQ3KP66 663 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 DHRS13Q6UX07 377 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 SND1Q7KZF4 910 aaKnown RBP eCLIP16.04■□□□□ 0.16
TRA2A-203ENST00000448549 CIR1Q86X95 450 aaPredicted RBP16.04■□□□□ 0.16
TRA2A-203ENST00000448549 OR14C36Q8NHC7 312 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 HNRNPLLQ8WVV9 542 aaKnown RBP16.04■□□□□ 0.16
TRA2A-203ENST00000448549 SKA1Q96BD8 255 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 MED15Q96RN5 788 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 SRRTQ9BXP5 876 aaKnown RBP16.04■□□□□ 0.16
TRA2A-203ENST00000448549 THAP9Q9H5L6 903 aa16.04■□□□□ 0.16
TRA2A-203ENST00000448549 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.04■□□□□ 0.16
TRA2A-203ENST00000448549 NUMA1Q14980 2115 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 DSPP15924 2871 aaKnown RBP16.03■□□□□ 0.16
TRA2A-203ENST00000448549 KCNU1A8MYU2 1149 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 C10orf142B7Z368 130 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 F5H5T6 163 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms