RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 RFC1P35251 1148 aaPredicted RBP13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 PTGER3P43115 390 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 CTSOP43234 321 aaPredicted RBP13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 TPM4P67936 248 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 ARHGAP8P85298 464 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 ATP11AP98196 1134 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 RPL6Q02878 288 aaKnown RBP13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 RSPO4Q2I0M5 234 aaPredicted RBP13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 PLEKHG6Q3KR16 790 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 CCDC14Q49A88 953 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 SH3PXD2AQ5TCZ1 1133 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 TTC39BQ5VTQ0 682 aaPredicted RBP13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 CXorf57Q6NSI4 855 aaKnown RBP13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 SLC36A4Q6YBV0 504 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 MON1BQ7L1V2 547 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 ZNF683Q8IZ20 524 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 OR52K2Q8NGK3 314 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 JOSD2Q8TAC2 188 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 RXFP2Q8WXD0 754 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 SIPA1Q96FS4 1042 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 MRGPRX3Q96LB0 322 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 C1orf74Q96LT6 269 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 TTYH3Q9C0H2 523 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 MTG2Q9H4K7 406 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 PRSS16Q9NQE7 514 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 ITM2CQ9NQX7 267 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 AIPL1Q9NZN9 384 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 SUN2Q9UH99 717 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 ERVW-1Q9UQF0 538 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 PAXBP1Q9Y5B6 917 aa13.14□□□□□ -0.31
PRPF40A-203ENST00000448428 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 SIGLEC16A6NMB1 481 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 DRGXA6NNA5 263 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 GOLGA6L19H0YKK7 550 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 GDF9O60383 454 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 CNTN5O94779 1100 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 MOCS3O95396 460 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 CALB1P05937 261 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 KRT3P12035 628 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 TNFAIP3P21580 790 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 RDXP35241 583 aaKnown RBP13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 NUMBP49757 651 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 TPMTP51580 245 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 PLK1P53350 603 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 GSCP56915 257 aaPredicted RBP13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 UBASH3AP57075 661 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 ST8SIA6P61647 398 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 ECT2LQ008S8 904 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 C1QBPQ07021 282 aaKnown RBP13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 SLC12A1Q13621 1099 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 C15orf59Q2T9L4 293 aaPredicted RBP13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 SPDYCQ5MJ68 293 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 ARTNQ5T4W7 220 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 SFMBT2Q5VUG0 894 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 ACAD10Q6JQN1 1059 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 WDR59Q6PJI9 974 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 ARMCX6Q7L4S7 300 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 FAM131BQ86XD5 332 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 OR2T3Q8NH03 318 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 PRCCQ92733 491 aaPredicted RBP13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 ALG14Q96F25 216 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 HAPLN3Q96S86 360 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 FEM1AQ9BSK4 669 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 EDEM3Q9BZQ6 932 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 VPS45Q9NRW7 570 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 RXFP3Q9NSD7 469 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 DLL3Q9NYJ7 618 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 USP36Q9P275 1121 aaKnown RBP13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 SLCO3A1Q9UIG8 710 aa13.13□□□□□ -0.31
PRPF40A-203ENST00000448428 PI4KAP42356 2102 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 TCRBV5S1A1TA0A578 114 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 TTC34A8MYJ7 566 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 AP5Z1O43299 807 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 FOXD2O60548 495 aaPredicted RBP13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 CLDN11O75508 207 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 SRPRAP08240 638 aaKnown RBP13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 C7P10643 843 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 SDC4P31431 198 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 PBX1P40424 430 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 PTPN9P43378 593 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 CDH4P55283 916 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 OXCT1P55809 520 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 ZNF177Q13360 481 aaPredicted RBP13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 ARID5BQ14865 1188 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 ASIC2Q16515 512 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 CDO1Q16878 200 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 HNRNPA1L2Q32P51 320 aaKnown RBP13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 ALFQ53S48 1182 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 FIGNQ5HY92 759 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 E4F1Q66K89 784 aaPredicted RBP13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 TCEAL6Q6IPX3 200 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 LRRC31Q6UY01 552 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 CYP2U1Q7Z449 544 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 CACUL1Q86Y37 369 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 SLC41A1Q8IVJ1 513 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 MCOLN2Q8IZK6 566 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 C12orf50Q8NA57 414 aaPredicted RBP13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 KDM1BQ8NB78 822 aa13.12□□□□□ -0.31
PRPF40A-203ENST00000448428 C3orf20Q8ND61 904 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms