RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 PNMA6FA0A0J9YX94 578 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 PDCD5O14737 125 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 IREB2P48200 963 aaKnown RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 IDH2P48735 452 aaKnown RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 PITPNAQ00169 270 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 CBX3Q13185 183 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF211Q13398 564 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 TBC1D25Q3MII6 688 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 KCNV1Q6PIU1 500 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 TMED8Q6PL24 325 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 THNSL1Q8IYQ7 743 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 IPMKQ8NFU5 416 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 GPT2Q8TD30 523 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 UBE2E3Q969T4 207 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 RIT2Q99578 217 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 DCLK3Q9C098 648 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 IFT46Q9NQC8 304 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 ESYT3A0FGR9 886 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 LCP1P13796 627 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 EPCAMP16422 314 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 TLX1P31314 330 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 HSD17B2P37059 387 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 KCNJ6P48051 423 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 USP51Q70EK9 711 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 AMIGO1Q86WK6 493 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 ADSSL1Q8N142 457 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 EIF1ADQ8N9N8 165 aaKnown RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 MKL1Q969V6 931 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 AP2S1P53680 142 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 MROH9Q5TGP6 573 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 FAM49BQ9NUQ9 324 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 TTC26A0AVF1 554 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 TFECO14948 347 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 CD4P01730 458 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 ELK3P41970 407 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 CPA2P48052 419 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 CYP20A1Q6UW02 462 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF75CPQ92670 426 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF669Q96BR6 464 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 TEFMQ96QE5 360 aaKnown RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 ACAT2Q9BWD1 397 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 SPATA9Q9BWV2 254 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 CD248Q9HCU0 757 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 GGA2Q9UJY4 613 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 NCOA1Q15788 1441 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 TTC3P53804 2025 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 MAGEB16A2A368 324 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 PLA2G6O60733 806 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 KDM4BO94953 1096 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 FGAP02671 866 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF14P17017 642 aaPredicted RBP9.09□□□□□ -0.95
NIPBL-202ENST00000448238 NMT1P30419 496 aaKnown RBP9.09□□□□□ -0.95
NIPBL-202ENST00000448238 RGS19P49795 217 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 TTLL4Q14679 1199 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 SYDE2Q5VT97 1194 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 ENGASEQ8NFI3 743 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 OR5J2Q8NH18 312 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 ASB12Q8WXK4 309 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 MS4A14Q96JA4 679 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 ATXN10Q9UBB4 475 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 CYTH4Q9UIA0 394 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 RPS6KL1Q9Y6S9 549 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 PCDHGA12O60330 932 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 RHOBTB3O94955 611 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 GARTP22102 1010 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 HOXC12P31275 282 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 MTMR1Q13613 665 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 CLCA4Q14CN2 919 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 PCID2Q5JVF3 399 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 HSDL2Q6YN16 418 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 GAS2L3Q86XJ1 694 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 GJD3Q8N144 294 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF709Q8N972 641 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 DNAJB14Q8TBM8 379 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 MGME1Q9BQP7 344 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 FLT4P35916 1363 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 SDR42E2A6NKP2 422 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 CREB5Q02930 508 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 SLC39A6Q13433 755 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 ARMC10Q8N2F6 343 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 C12orf50Q8NA57 414 aaPredicted RBP9.09□□□□□ -0.95
NIPBL-202ENST00000448238 TEX47Q8TBZ9 253 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 PAGE5Q96GU1 130 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 FAM20AQ96MK3 541 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 MTG1Q9BT17 334 aaPredicted RBP9.09□□□□□ -0.95
NIPBL-202ENST00000448238 ARMCX1Q9P291 453 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 KIAA1257Q9ULG3 409 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 H3BNX3 289 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 MATN2O00339 956 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 FAM131AQ6UXB0 335 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 COA7Q96BR5 231 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 PLEKHF1Q96S99 279 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 SQORQ9Y6N5 450 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 FCHO1O14526 889 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 PRPF3O43395 683 aaKnown RBP9.09□□□□□ -0.95
NIPBL-202ENST00000448238 TADA2AO75478 443 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 TNK2Q07912 1038 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 PAGE2BQ5JRK9 111 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 ZFP28Q8NHY6 868 aa9.09□□□□□ -0.95
NIPBL-202ENST00000448238 NXNL1Q96CM4 212 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms