RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 MINDY1Q8N5J2 469 aa18.27■□□□□ 0.52
DDX56-207ENST00000448192 DEFB124Q8NES8 71 aa18.27■□□□□ 0.52
DDX56-207ENST00000448192 OR2I1PQ8NGU4 316 aa18.27■□□□□ 0.52
DDX56-207ENST00000448192 DNASE2BQ8WZ79 361 aa18.27■□□□□ 0.52
DDX56-207ENST00000448192 SIK2Q9H0K1 926 aa18.27■□□□□ 0.52
DDX56-207ENST00000448192 FAM207AQ9NSI2 230 aaPredicted RBP18.27■□□□□ 0.52
DDX56-207ENST00000448192 RRN3Q9NYV6 651 aa18.27■□□□□ 0.52
DDX56-207ENST00000448192 VANGL2Q9ULK5 521 aa18.27■□□□□ 0.52
DDX56-207ENST00000448192 A0A1B0GVM2 712 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 TCAF2A6NFQ2 919 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 TTC34A8MYJ7 566 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 GOLGA8SH3BPF8 625 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 PAGE1O75459 146 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 GFPT2O94808 682 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 SRPRAP08240 638 aaKnown RBP18.26■□□□□ 0.51
DDX56-207ENST00000448192 MMEP08473 750 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 CSRP1P21291 193 aaKnown RBP18.26■□□□□ 0.51
DDX56-207ENST00000448192 ACSL1P33121 698 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 GGCXP38435 758 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 GABRB2P47870 512 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 SULT1E1P49888 294 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 CENPCQ03188 943 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 ZBTB16Q05516 673 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 MTA1Q13330 715 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 AUHQ13825 339 aaKnown RBP18.26■□□□□ 0.51
DDX56-207ENST00000448192 STX1AQ16623 288 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 TTC31Q49AM3 519 aaPredicted RBP18.26■□□□□ 0.51
DDX56-207ENST00000448192 C2CD6Q53TS8 623 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 SND1Q7KZF4 910 aaKnown RBP eCLIP18.26■□□□□ 0.51
DDX56-207ENST00000448192 XYLT1Q86Y38 959 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 ZCCHC9Q8N567 271 aaKnown RBP18.26■□□□□ 0.51
DDX56-207ENST00000448192 EPS8L1Q8TE68 723 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 GANCQ8TET4 914 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 CPA5Q8WXQ8 436 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 SNX19Q92543 992 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 IGSF8Q969P0 613 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 RPL10LQ96L21 214 aaKnown RBP18.26■□□□□ 0.51
DDX56-207ENST00000448192 PCMTD1Q96MG8 357 aaPredicted RBP18.26■□□□□ 0.51
DDX56-207ENST00000448192 CNTNAP3BQ96NU0 1288 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 NPY6RQ99463 290 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 CNTNAP3Q9BZ76 1288 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 RSPH9Q9H1X1 276 aaPredicted RBP18.26■□□□□ 0.51
DDX56-207ENST00000448192 GANQ9H2C0 597 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 C6orf106Q9H6K1 298 aaPredicted RBP18.26■□□□□ 0.51
DDX56-207ENST00000448192 NLRC4Q9NPP4 1024 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 PIGVQ9NUD9 493 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 EIF2B4Q9UI10 523 aaKnown RBP18.26■□□□□ 0.51
DDX56-207ENST00000448192 SLCO3A1Q9UIG8 710 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 STAP1Q9ULZ2 295 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 HS3ST4Q9Y661 456 aa18.26■□□□□ 0.51
DDX56-207ENST00000448192 A0A1B0GTW7 788 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 OPHN1O60890 802 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 RNASEH1O60930 286 aaKnown RBP18.25■□□□□ 0.51
DDX56-207ENST00000448192 LSM8O95777 96 aaKnown RBP18.25■□□□□ 0.51
DDX56-207ENST00000448192 CEACAM1P13688 526 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 TFE3P19532 575 aaPredicted RBP18.25■□□□□ 0.51
DDX56-207ENST00000448192 MZF1P28698 734 aaPredicted RBP18.25■□□□□ 0.51
DDX56-207ENST00000448192 STK19P49842 368 aaPredicted RBP18.25■□□□□ 0.51
DDX56-207ENST00000448192 SLC12A1Q13621 1099 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 OTUD1Q5VV17 481 aaPredicted RBP18.25■□□□□ 0.51
DDX56-207ENST00000448192 NAA35Q5VZE5 725 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 KDM1BQ8NB78 822 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 MSANTD4Q8NCY6 345 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 ANKRD20A12PQ8NF67 263 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 SLC20A1Q8WUM9 679 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 ADAM33Q9BZ11 813 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 BTBD1Q9H0C5 482 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 TKTL2Q9H0I9 626 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 WDCPQ9H6R7 721 aa18.25■□□□□ 0.51
DDX56-207ENST00000448192 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.24■□□□□ 0.51
DDX56-207ENST00000448192 EDDM13A0A1B0GTR0 161 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 BCAT2O15382 392 aaPredicted RBP18.24■□□□□ 0.51
DDX56-207ENST00000448192 ADCY5O95622 1261 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 SEMA4FO95754 770 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 C7P10643 843 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 CDK11BP21127 795 aaKnown RBP18.24■□□□□ 0.51
DDX56-207ENST00000448192 NNMTP40261 264 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 CXCR3P49682 368 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 IRAK1P51617 712 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 COPB1P53618 953 aaKnown RBP18.24■□□□□ 0.51
DDX56-207ENST00000448192 OXCT1P55809 520 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 NOMO3P69849 1222 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 MYL5Q02045 173 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 DEUP1Q05D60 604 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 ZNF252P-AS1Q0IIN9 211 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 ZNF177Q13360 481 aaPredicted RBP18.24■□□□□ 0.51
DDX56-207ENST00000448192 C9orf64Q5T6V5 341 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 C14orf80Q86SX3 495 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 MMAAQ8IVH4 418 aaKnown RBP18.24■□□□□ 0.51
DDX56-207ENST00000448192 TBCBQ99426 244 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 PCED1AQ9H1Q7 454 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 PABPC3Q9H361 631 aaKnown RBP18.24■□□□□ 0.51
DDX56-207ENST00000448192 SLC32A1Q9H598 525 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 ANGPTL2Q9UKU9 493 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 NCKAP1Q9Y2A7 1128 aa18.24■□□□□ 0.51
DDX56-207ENST00000448192 ITIH6Q6UXX5 1313 aa18.23■□□□□ 0.51
DDX56-207ENST00000448192 TARSL2A2RTX5 802 aaKnown RBP18.23■□□□□ 0.51
DDX56-207ENST00000448192 EPHB6O15197 1021 aa18.23■□□□□ 0.51
DDX56-207ENST00000448192 MBD3O95983 291 aa18.23■□□□□ 0.51
DDX56-207ENST00000448192 F9P00740 461 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms