RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 COMMD3-BMI1R4GMX3 469 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 FRMPD4Q14CM0 1322 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 MYO3AQ8NEV4 1616 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 USP32Q8NFA0 1604 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 FAM237AA0A1B0GTK4 181 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 ENTPD5O75356 428 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 SHBGP04278 402 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 ABHD2P08910 425 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 PCNAP12004 261 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 CCDC130P13994 396 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 FLT3P36888 993 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 FEN1P39748 380 aaKnown RBP7.93□□□□□ -1.14
NEDD9-204ENST00000448183 ITGADQ13349 1161 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 TMEM132BQ14DG7 1078 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 NFE2Q16621 373 aaPredicted RBP7.93□□□□□ -1.14
NEDD9-204ENST00000448183 C16orf46Q6P387 395 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 CES3Q6UWW8 571 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 ZNF662Q6ZS27 426 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 SYTL1Q8IYJ3 562 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 PCDH20Q8N6Y1 951 aaKnown RBP7.93□□□□□ -1.14
NEDD9-204ENST00000448183 TSPAN14Q8NG11 270 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 CENPIQ92674 756 aaPredicted RBP7.93□□□□□ -1.14
NEDD9-204ENST00000448183 MCRS1Q96EZ8 462 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 NUDT12Q9BQG2 462 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 DGCR6LQ9BY27 220 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 NUAK2Q9H093 628 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 KLHL31Q9H511 634 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 ARHGEF3Q9NR81 526 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 PIH1D1Q9NWS0 290 aaKnown RBP7.93□□□□□ -1.14
NEDD9-204ENST00000448183 BTBD3Q9Y2F9 522 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 DEPDC5O75140 1603 aa7.93□□□□□ -1.14
NEDD9-204ENST00000448183 FAM237BA0A1B0GVD1 139 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 UBXN8O00124 270 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 GPR182O15218 404 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 SEC22BO75396 215 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 KATNA1O75449 491 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 RECQL5O94762 991 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 EGFRP00533 1210 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 MYL12AP19105 171 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 RBL1P28749 1068 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 TPP2P29144 1249 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 GSSP48637 474 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 SLC25A3Q00325 362 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 PDK3Q15120 406 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 RGS21Q2M5E4 152 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 PRAMEF18Q5VWM3 479 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 DHDDSQ86SQ9 333 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CDK20Q8IZL9 346 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 PGBD3Q8N328 593 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 TMEM132CQ8N3T6 1108 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 SYTL5Q8TDW5 730 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 RTFDC1Q9BY42 306 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 PTPRHQ9HD43 1115 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 AHSPQ9NZD4 102 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 SALL1Q9NSC2 1324 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 EFCAB10A6NFE3 127 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CSDE1O75534 798 aaKnown RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 KRT36O76013 467 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ENDOD1O94919 500 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 SLITRK3O94933 977 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 THP07101 528 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ZSCAN5DPP0CG00 497 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ATP6V1C1P21283 382 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 PLK1P53350 603 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 LAMTOR4Q0VGL1 99 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 TOP3AQ13472 1001 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ITPK1Q13572 414 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 VPS72Q15906 364 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 SWT1Q5T5J6 900 aaKnown RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 KLHL17Q6TDP4 642 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 C3orf67Q6ZVT6 689 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 VN1R5Q7Z5H4 357 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 MILR1Q7Z6M3 343 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ZNF605Q86T29 641 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 BRSK2Q8IWQ3 736 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ADHFE1Q8IWW8 467 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 AGBL3Q8NEM8 1001 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 FLCNQ8NFG4 579 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 EPS8L1Q8TE68 723 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 UBASH3BQ8TF42 649 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ZDHHC15Q96MV8 337 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 POMKQ9H5K3 350 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ASB7Q9H672 318 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 PXMP2Q9NR77 195 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ASTN2O75129 1339 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 A0A087WZ62 844 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 TRIM43BA6NCK2 446 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 TBKBP1A7MCY6 615 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 H3BN98 237 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 H7C4K7 107 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CBX4O00257 560 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 MYL12BO14950 172 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CHADO15335 359 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 RAMP2O60895 175 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 TSHRP16473 764 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 ZNF7P17097 686 aaPredicted RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 PAICSP22234 425 aaKnown RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 RPS12P25398 132 aaKnown RBP7.92□□□□□ -1.14
NEDD9-204ENST00000448183 DSG3P32926 999 aa7.92□□□□□ -1.14
NEDD9-204ENST00000448183 CBWD6Q4V339 395 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms