RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 ACMSDQ8TDX5 336 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 NXF3Q9H4D5 531 aaKnown RBP13.22□□□□□ -0.29
SHC1-210ENST00000448116 UBP1Q9NZI7 540 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 ANKRD33BA6NCL7 494 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 FKBP6O75344 327 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 GP5P40197 560 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 TRIP10Q15642 601 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 PIGZQ86VD9 579 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 ZDHHC17Q8IUH5 632 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 DCPSQ96C86 337 aaKnown RBP13.22□□□□□ -0.29
SHC1-210ENST00000448116 CERS2Q96G23 380 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 FCRL3Q96P31 734 aaPredicted RBP13.22□□□□□ -0.29
SHC1-210ENST00000448116 SORT1Q99523 831 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 OSMRQ99650 979 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 AIM2O14862 343 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 DGKIO75912 1065 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 CYP2C8P10632 490 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 SERPINB5P36952 375 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 GRIK4Q16099 956 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 GRAMD1BQ3KR37 738 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 FOXB2Q5VYV0 432 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 ZNF781Q8N8C0 355 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 TRIM4Q9C037 500 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 CDHR5Q9HBB8 845 aa13.22□□□□□ -0.29
SHC1-210ENST00000448116 AHCYL1O43865 530 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 RECQL4O94761 1208 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 FESP07332 822 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 GRK2P25098 689 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 ATXN3P54252 364 aaPredicted RBP13.21□□□□□ -0.29
SHC1-210ENST00000448116 IRF9Q00978 393 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 TBL3Q12788 808 aaKnown RBP13.21□□□□□ -0.29
SHC1-210ENST00000448116 PDK1Q15118 436 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 FRMD7Q6ZUT3 714 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 CMTM5Q96DZ9 223 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 COG4Q9H9E3 785 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 LRRC4Q9HBW1 653 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 FZD10Q9ULW2 581 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 PPP2R3BQ9Y5P8 575 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 DNAJC25-GNG10A0A024R161 153 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 A0A0G2JLL6 359 aaPredicted RBP13.21□□□□□ -0.29
SHC1-210ENST00000448116 ASB14A6NK59 587 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 EEF2KO00418 725 aaKnown RBP13.21□□□□□ -0.29
SHC1-210ENST00000448116 ALDH1A2O94788 518 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 DDNO94850 711 aaPredicted RBP13.21□□□□□ -0.29
SHC1-210ENST00000448116 MSX2P35548 267 aaPredicted RBP13.21□□□□□ -0.29
SHC1-210ENST00000448116 MATKP42679 507 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 IREB2P48200 963 aaKnown RBP13.21□□□□□ -0.29
SHC1-210ENST00000448116 POU5F1BQ06416 359 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 FBXO47Q5MNV8 452 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 TMCO4Q5TGY1 634 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 C9orf57Q5W0N0 161 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 STEAP4Q687X5 459 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 PRRT2Q7Z6L0 340 aaPredicted RBP13.21□□□□□ -0.29
SHC1-210ENST00000448116 DHDDSQ86SQ9 333 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 MED10Q9BTT4 135 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 CENPOQ9BU64 300 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 C1orf21Q9H246 121 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 CDH22Q9UJ99 828 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 SORCS3Q9UPU3 1222 aa13.21□□□□□ -0.29
SHC1-210ENST00000448116 ANK1P16157 1881 aa13.21□□□□□ -0.3
SHC1-210ENST00000448116 A0A096LPK6 155 aa13.21□□□□□ -0.3
SHC1-210ENST00000448116 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.21□□□□□ -0.3
SHC1-210ENST00000448116 SPTLC1O15269 473 aa13.21□□□□□ -0.3
SHC1-210ENST00000448116 CFLARO15519 480 aa13.21□□□□□ -0.3
SHC1-210ENST00000448116 MLNP12872 115 aa13.21□□□□□ -0.3
SHC1-210ENST00000448116 DEUP1Q05D60 604 aa13.21□□□□□ -0.3
SHC1-210ENST00000448116 SYPL2Q5VXT5 272 aa13.21□□□□□ -0.3
SHC1-210ENST00000448116 ZNF280DQ6N043 979 aa13.21□□□□□ -0.3
SHC1-210ENST00000448116 GDPD5Q8WTR4 605 aa13.21□□□□□ -0.3
SHC1-210ENST00000448116 CENPIQ92674 756 aaPredicted RBP13.21□□□□□ -0.3
SHC1-210ENST00000448116 MFSD3Q96ES6 412 aa13.21□□□□□ -0.3
SHC1-210ENST00000448116 WDR55Q9H6Y2 383 aaPredicted RBP13.21□□□□□ -0.3
SHC1-210ENST00000448116 BFARQ9NZS9 450 aa13.21□□□□□ -0.3
SHC1-210ENST00000448116 ASB3Q9Y575 518 aa13.21□□□□□ -0.3
SHC1-210ENST00000448116 KPNA7A9QM74 516 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 HACD1B0YJ81 288 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 RNASEH1O60930 286 aaKnown RBP13.2□□□□□ -0.3
SHC1-210ENST00000448116 PEX2P28328 305 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 TKTP29401 623 aaKnown RBP13.2□□□□□ -0.3
SHC1-210ENST00000448116 SPRP35270 261 aaPredicted RBP13.2□□□□□ -0.3
SHC1-210ENST00000448116 GLRBP48167 497 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 CDK18Q07002 472 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 SLC9B1Q4ZJI4 515 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 SFT2D3Q587I9 215 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 CERCAMQ5T4B2 595 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 NXNQ6DKJ4 435 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 NT5DC4Q86YG4 428 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 OR6Y1Q8NGX8 325 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 OLFM3Q96PB7 478 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 SH3GL3Q99963 347 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 UNKQ9C0B0 810 aaKnown RBP13.2□□□□□ -0.3
SHC1-210ENST00000448116 GPAMQ9HCL2 828 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 PDP2Q9P2J9 529 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 GJD2Q9UKL4 321 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 ADAMTS6Q9UKP5 1117 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 STAU1O95793 577 aaKnown RBP13.2□□□□□ -0.3
SHC1-210ENST00000448116 PRKCGP05129 697 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 CD1EP15812 388 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 RAG1P15918 1043 aa13.2□□□□□ -0.3
SHC1-210ENST00000448116 CCNIQ14094 377 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms