RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 NUP205Q92621 2012 aa20.08■□□□□ 0.81
SGCE-207ENST00000447873 SPTBN5Q9NRC6 3674 aaKnown RBP20.08■□□□□ 0.81
SGCE-207ENST00000447873 GRXCR2A6NFK2 248 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 TBL1XO60907 577 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 MAP3K6O95382 1288 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 FCARP24071 287 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 OR1E1P30953 314 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 CDH4P55283 916 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 SNX1Q13596 522 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 NOMO1Q15155 1222 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 MPPE1Q53F39 396 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 TANGO2Q6ICL3 276 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 TPGS1Q6ZTW0 290 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 NPWQ8N729 165 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 ST13P5Q8NFI4 369 aaPredicted RBP20.08■□□□□ 0.8
SGCE-207ENST00000447873 KRT12Q99456 494 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 LINC00597Q9H2U6 94 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 LRRC19Q9H756 370 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 DTLQ9NZJ0 730 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 WNT6Q9Y6F9 365 aa20.08■□□□□ 0.8
SGCE-207ENST00000447873 EYSQ5T1H1 3165 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 A0A1B0GVM2 712 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 TCAF2A6NFQ2 919 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 GFRA2O00451 464 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 MCF2LO15068 1137 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 MBTPS2O43462 519 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 LIASO43766 372 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 CLDN11O75508 207 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 CYBBP04839 570 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 CHRNA3P32297 505 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 EIF3EP60228 445 aaKnown RBP20.07■□□□□ 0.8
SGCE-207ENST00000447873 SLC10A2Q12908 348 aaPredicted RBP20.07■□□□□ 0.8
SGCE-207ENST00000447873 BYSLQ13895 437 aaKnown RBP20.07■□□□□ 0.8
SGCE-207ENST00000447873 CHST9Q7L1S5 443 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 ZC3H18Q86VM9 953 aaKnown RBP20.07■□□□□ 0.8
SGCE-207ENST00000447873 LRRN4CLQ8ND94 238 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 OSCP1Q8WVF1 389 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 NDFIP2Q9NV92 336 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 THG1LQ9NWX6 298 aaKnown RBP20.07■□□□□ 0.8
SGCE-207ENST00000447873 DUS2Q9NX74 493 aaKnown RBP20.07■□□□□ 0.8
SGCE-207ENST00000447873 DNPEPQ9ULA0 475 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 RAD54BQ9Y620 910 aa20.07■□□□□ 0.8
SGCE-207ENST00000447873 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.06■□□□□ 0.8
SGCE-207ENST00000447873 SP100P23497 879 aaPredicted RBP20.06■□□□□ 0.8
SGCE-207ENST00000447873 MAPKAPK2P49137 400 aa20.06■□□□□ 0.8
SGCE-207ENST00000447873 ZNF177Q13360 481 aaPredicted RBP20.06■□□□□ 0.8
SGCE-207ENST00000447873 CCDC137Q6PK04 289 aaKnown RBP20.06■□□□□ 0.8
SGCE-207ENST00000447873 NETO2Q8NC67 525 aa20.06■□□□□ 0.8
SGCE-207ENST00000447873 BHMTQ93088 406 aa20.06■□□□□ 0.8
SGCE-207ENST00000447873 CELF6Q96J87 481 aaKnown RBP20.06■□□□□ 0.8
SGCE-207ENST00000447873 ZNF212Q9UDV6 495 aa20.06■□□□□ 0.8
SGCE-207ENST00000447873 H7C0C1 242 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 NCAM2O15394 837 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 RBP3P10745 1247 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 MX2P20592 715 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 COILP38432 576 aaPredicted RBP20.05■□□□□ 0.8
SGCE-207ENST00000447873 ATP5OP48047 213 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 IFNAR2P48551 515 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 FNTAP49354 379 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 PDK1Q15118 436 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 MPP7Q5T2T1 576 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 TTC27Q6P3X3 843 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 DRICH1Q6PGQ1 229 aaPredicted RBP20.05■□□□□ 0.8
SGCE-207ENST00000447873 PARM1Q6UWI2 310 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 VITQ6UXI7 678 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 MTSS1LQ765P7 747 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 CCDC105Q8IYK2 499 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 ADGRG2Q8IZP9 1017 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 UMODL1-AS1Q8N2C9 162 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 CARNMT1Q8N4J0 409 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 CCDC33Q8N5R6 958 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 NOA1Q8NC60 698 aaKnown RBP20.05■□□□□ 0.8
SGCE-207ENST00000447873 SLC35B2Q8TB61 432 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 IRF7Q92985 503 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 NKD2Q969F2 451 aaPredicted RBP20.05■□□□□ 0.8
SGCE-207ENST00000447873 ELSPBP1Q96BH3 223 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 OLFM3Q96PB7 478 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 KLC2Q9H0B6 622 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 EPS15L1Q9UBC2 864 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 ZNF148Q9UQR1 794 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 MYOFQ9NZM1 2061 aa20.05■□□□□ 0.8
SGCE-207ENST00000447873 H0Y626 953 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 KCNJ1P48048 391 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 NDST2P52849 883 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 XRCC4Q13426 336 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 C6orf118Q5T5N4 469 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 CCDC117Q8IWD4 279 aaPredicted RBP20.04■□□□□ 0.8
SGCE-207ENST00000447873 MFSD6LQ8IWD5 586 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 TP53INP2Q8IXH6 220 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 MMGT1Q8N4V1 131 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 CCDC114Q96M63 670 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 RUNDC3BQ96NL0 473 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 KXD1Q9BQD3 176 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 SPHK2Q9NRA0 654 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 DFFAO00273 331 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 PPP1R12AO14974 1030 aaPredicted RBP20.04■□□□□ 0.8
SGCE-207ENST00000447873 RAMP2O60895 175 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 LUC7L3O95232 432 aaKnown RBP20.04■□□□□ 0.8
SGCE-207ENST00000447873 GALNT2Q10471 571 aa20.04■□□□□ 0.8
SGCE-207ENST00000447873 CDH18Q13634 790 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms