RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SDE2Q6IQ49 451 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 CXorf57Q6NSI4 855 aaKnown RBP12.28□□□□□ -0.44
RFC4-208ENST00000447345 RWDD4Q6NW29 188 aaKnown RBP12.28□□□□□ -0.44
RFC4-208ENST00000447345 ZC3H14Q6PJT7 736 aaKnown RBP12.28□□□□□ -0.44
RFC4-208ENST00000447345 SERPINA13PQ6UXR4 307 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 LRRC31Q6UY01 552 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 MAMSTRQ6ZN01 415 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 SLFN11Q7Z7L1 901 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 CACUL1Q86Y37 369 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 ZNF683Q8IZ20 524 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 APCDD1Q8J025 514 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 PYROXD2Q8N2H3 581 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 PGBD3Q8N328 593 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 ZNF557Q8N988 423 aaPredicted RBP12.28□□□□□ -0.44
RFC4-208ENST00000447345 MDGA1Q8NFP4 955 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 OR52K2Q8NGK3 314 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 HMGB4Q8WW32 186 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 ATRIPQ8WXE1 791 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 BTBD6Q96KE9 485 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 CCDC42Q96M95 316 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 HAPLN3Q96S86 360 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 NHEJ1Q9H9Q4 299 aaPredicted RBP12.28□□□□□ -0.44
RFC4-208ENST00000447345 GPATCH2LQ9NWQ4 482 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 KIAA1522Q9P206 1035 aaPredicted RBP12.28□□□□□ -0.44
RFC4-208ENST00000447345 PCSK1NQ9UHG2 260 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 ANAPC7Q9UJX3 599 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 INTS6Q9UL03 887 aaKnown RBP12.28□□□□□ -0.44
RFC4-208ENST00000447345 NENFQ9UMX5 172 aa12.28□□□□□ -0.44
RFC4-208ENST00000447345 SHROOM3Q8TF72 1996 aa12.27□□□□□ -0.44
RFC4-208ENST00000447345 NUP205Q92621 2012 aa12.27□□□□□ -0.44
RFC4-208ENST00000447345 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.27□□□□□ -0.45
RFC4-208ENST00000447345 FAM72CH0Y354 149 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 MOCS3O95396 460 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 RHOCP08134 193 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 CTSOP43234 321 aaPredicted RBP12.27□□□□□ -0.45
RFC4-208ENST00000447345 DGKEP52429 567 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 NRLP54845 237 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 ZNF177Q13360 481 aaPredicted RBP12.27□□□□□ -0.45
RFC4-208ENST00000447345 ASTE1Q2TB18 679 aaPredicted RBP12.27□□□□□ -0.45
RFC4-208ENST00000447345 PLEKHG6Q3KR16 790 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 EFHC2Q5JST6 749 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 FAM72AQ5TYM5 149 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 RNF219Q5W0B1 726 aaPredicted RBP12.27□□□□□ -0.45
RFC4-208ENST00000447345 FAM72DQ6L9T8 149 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 KIAA1211LQ6NV74 962 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 KIAA0907Q7Z7F0 614 aaPredicted RBP12.27□□□□□ -0.45
RFC4-208ENST00000447345 LONP2Q86WA8 852 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 FAM72BQ86X60 149 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 SPC24Q8NBT2 197 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 KCNV2Q8TDN2 545 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 CTNNBL1Q8WYA6 563 aaPredicted RBP12.27□□□□□ -0.45
RFC4-208ENST00000447345 NTAN1Q96AB6 310 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 FAM122AQ96E09 287 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 LMLNQ96KR4 655 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 PEBP4Q96S96 227 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 GABRG3Q99928 467 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 MUC3BQ9H195 1237 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 SLC6A17Q9H1V8 727 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 POLMQ9NP87 494 aaPredicted RBP12.27□□□□□ -0.45
RFC4-208ENST00000447345 TMEM51Q9NW97 253 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 CTTNBP2NLQ9P2B4 639 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 THAP10Q9P2Z0 257 aaPredicted RBP12.27□□□□□ -0.45
RFC4-208ENST00000447345 OR12D3Q9UGF7 316 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 INVSQ9Y283 1065 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 ARIH1Q9Y4X5 557 aaPredicted RBP12.27□□□□□ -0.45
RFC4-208ENST00000447345 PCDHGA2Q9Y5H1 932 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 MYO15AQ9UKN7 3530 aa12.27□□□□□ -0.45
RFC4-208ENST00000447345 TNRC6BQ9UPQ9 1833 aaKnown RBP12.26□□□□□ -0.45
RFC4-208ENST00000447345 IGLV3-10A0A075B6K4 115 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 A0A1W2PQF6 199 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 AXIN1O15169 862 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 CREB3O43889 395 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 CLDN11O75508 207 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 RNF8O76064 485 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 ALDH1A2O94788 518 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 LRIG2O94898 1065 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 CYP1A2P05177 515 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 ATP5BP06576 529 aaKnown RBP12.26□□□□□ -0.45
RFC4-208ENST00000447345 EPHX1P07099 455 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 DLDP09622 509 aaKnown RBP12.26□□□□□ -0.45
RFC4-208ENST00000447345 PLA2G5P39877 138 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 NBL1P41271 181 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 STK19P49842 368 aaPredicted RBP12.26□□□□□ -0.45
RFC4-208ENST00000447345 CDH4P55283 916 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 STARD3Q14849 445 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 LPAL2Q16609 132 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 PTPRNQ16849 979 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 C5orf22Q49AR2 442 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 PRR23BQ6ZRT6 265 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 WDR5BQ86VZ2 330 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 CAMKK1Q8N5S9 505 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 ARFGAP1Q8N6T3 406 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 ZBTB44Q8NCP5 570 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 ZNF564Q8TBZ8 553 aaPredicted RBP12.26□□□□□ -0.45
RFC4-208ENST00000447345 NELL1Q92832 810 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 TBC1D31Q96DN5 1066 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 C1orf74Q96LT6 269 aa12.26□□□□□ -0.45
RFC4-208ENST00000447345 SNRNP25Q9BV90 132 aaKnown RBP12.26□□□□□ -0.45
RFC4-208ENST00000447345 FAM126AQ9BYI3 521 aaPredicted RBP12.26□□□□□ -0.45
RFC4-208ENST00000447345 ZYG11BQ9C0D3 744 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms