RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 TMEM132BQ14DG7 1078 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 NFE2Q16621 373 aaPredicted RBP13.59□□□□□ -0.23
PRDM15-206ENST00000447016 FAM187BQ17R55 369 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 NT5DC4Q86YG4 428 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 SYTL1Q8IYJ3 562 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 ZNF276Q8N554 614 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 KBTBD8Q8NFY9 601 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 UBASH3BQ8TF42 649 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 PNMA5Q96PV4 448 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 OSBPL11Q9BXB4 747 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 ZMYM2Q9UBW7 1377 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 C3orf18Q9UK00 162 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 TSPAN19P0C672 248 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 ANPEPP15144 967 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 CCR1P32246 355 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 STX4Q12846 297 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 ARHGAP15Q53QZ3 475 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 TMEM63BQ5T3F8 832 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 ZNF470Q6ECI4 717 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 NUDT12Q9BQG2 462 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 ASB7Q9H672 318 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 PRDM5Q9NQX1 630 aaPredicted RBP13.59□□□□□ -0.23
PRDM15-206ENST00000447016 CHST7Q9NS84 486 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 TMCO1Q9UM00 188 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 TNPO3Q9Y5L0 923 aaKnown RBP13.59□□□□□ -0.23
PRDM15-206ENST00000447016 TRIM38O00635 465 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 B3GAT3O94766 335 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 CNPP09543 421 aaKnown RBP13.59□□□□□ -0.23
PRDM15-206ENST00000447016 RHOAP61586 193 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 ORC1Q13415 861 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 SQLEQ14534 574 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 MZT2AQ6P582 158 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.59□□□□□ -0.23
PRDM15-206ENST00000447016 KAT2BQ92831 832 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 CDK5RAP1Q96SZ6 601 aaKnown RBP13.59□□□□□ -0.23
PRDM15-206ENST00000447016 DOLKQ9UPQ8 538 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 FRMPD4Q14CM0 1322 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 BCLAF3A2AJT9 711 aaKnown RBP13.59□□□□□ -0.23
PRDM15-206ENST00000447016 C2CD2LO14523 706 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 CAPN1P07384 714 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 RHOCP08134 193 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 S100A3P33764 101 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 FEN1P39748 380 aaKnown RBP13.59□□□□□ -0.23
PRDM15-206ENST00000447016 BNIP2Q12982 314 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 ZPBP2Q6X784 338 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 RP9Q8TA86 221 aaKnown RBP13.59□□□□□ -0.23
PRDM15-206ENST00000447016 PIF1Q9H611 641 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 LRRC19Q9H756 370 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 TRPM5Q9NZQ8 1165 aa13.59□□□□□ -0.23
PRDM15-206ENST00000447016 PRPF19Q9UMS4 504 aaKnown RBP13.59□□□□□ -0.23
PRDM15-206ENST00000447016 SPHKAPQ2M3C7 1700 aa13.58□□□□□ -0.23
PRDM15-206ENST00000447016 TRIM43BA6NCK2 446 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 GPR182O15218 404 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 FLT3P36888 993 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 NIPA1Q7RTP0 329 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 MILR1Q7Z6M3 343 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 GPRC5AQ8NFJ5 357 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 FAM81AQ8TBF8 368 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 REPS1Q96D71 796 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 SLITRK2Q9H156 845 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 MTIF3Q9H2K0 278 aaKnown RBP13.58□□□□□ -0.24
PRDM15-206ENST00000447016 TUBA8Q9NY65 449 aaPredicted RBP13.58□□□□□ -0.24
PRDM15-206ENST00000447016 CHKBQ9Y259 395 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 RGSL1A5PLK6 1076 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 BIRC5O15392 142 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 DYRK3O43781 588 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 CCNT2O60583 730 aaKnown RBP13.58□□□□□ -0.24
PRDM15-206ENST00000447016 BMP10O95393 424 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 TKTL1P51854 596 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 SFSWAPQ12872 951 aaKnown RBP13.58□□□□□ -0.24
PRDM15-206ENST00000447016 RIPK1Q13546 671 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 TAF5Q15542 800 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 FBXO47Q5MNV8 452 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 ENTPD7Q9NQZ7 604 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 MRPL39Q9NYK5 338 aaKnown RBP13.58□□□□□ -0.24
PRDM15-206ENST00000447016 TSPAN16Q9UKR8 245 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 PDE2AO00408 941 aaPredicted RBP13.58□□□□□ -0.24
PRDM15-206ENST00000447016 SEC22BO75396 215 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 ALOX5P09917 674 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 COX4I1P13073 169 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 RPS12P25398 132 aaKnown RBP13.58□□□□□ -0.24
PRDM15-206ENST00000447016 YWHAZP63104 245 aaKnown RBP13.58□□□□□ -0.24
PRDM15-206ENST00000447016 KCNJ2P63252 427 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 INTS11Q5TA45 600 aaKnown RBP13.58□□□□□ -0.24
PRDM15-206ENST00000447016 MIB1Q86YT6 1006 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 ZSCAN18Q8TBC5 510 aaPredicted RBP13.58□□□□□ -0.24
PRDM15-206ENST00000447016 MAGEC3Q8TD91 643 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 QKIQ96PU8 341 aaKnown RBP eCLIP13.58□□□□□ -0.241e-6■■■■■ 35.6
PRDM15-206ENST00000447016 AGO4Q9HCK5 861 aaKnown RBP13.58□□□□□ -0.24
PRDM15-206ENST00000447016 STON1Q9Y6Q2 735 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 TNFRSF21O75509 655 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 VAPBO95292 243 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 JAK1P23458 1154 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 CCT3P49368 545 aaKnown RBP13.58□□□□□ -0.24
PRDM15-206ENST00000447016 PKNOX1P55347 436 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 ATAD3BQ5T9A4 648 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 ZCCHC23Q6ZST2 131 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 POMKQ9H5K3 350 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 SH3BP4Q9P0V3 963 aa13.58□□□□□ -0.24
PRDM15-206ENST00000447016 TRPC4Q9UBN4 977 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms