RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TIMM44O43615 452 aa15.29■□□□□ 0.04
HDAC4-204ENST00000446876 FTLP02792 175 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-204ENST00000446876 SERPING1P05155 500 aa15.29■□□□□ 0.04
HDAC4-204ENST00000446876 EPHX1P07099 455 aa15.29■□□□□ 0.04
HDAC4-204ENST00000446876 DLDP09622 509 aaKnown RBP15.29■□□□□ 0.04
HDAC4-204ENST00000446876 MZF1P28698 734 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-204ENST00000446876 PLEKHG6Q3KR16 790 aa15.29■□□□□ 0.04
HDAC4-204ENST00000446876 ARTNQ5T4W7 220 aa15.29■□□□□ 0.04
HDAC4-204ENST00000446876 TTC39BQ5VTQ0 682 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-204ENST00000446876 DCUN1D2Q6PH85 259 aa15.29■□□□□ 0.04
HDAC4-204ENST00000446876 STRADAQ7RTN6 431 aa15.29■□□□□ 0.04
HDAC4-204ENST00000446876 VSTM4Q8IW00 320 aa15.29■□□□□ 0.04
HDAC4-204ENST00000446876 ZNF557Q8N988 423 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-204ENST00000446876 CENPIQ92674 756 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-204ENST00000446876 SYN2Q92777 582 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-204ENST00000446876 ZNF653Q96CK0 615 aa15.29■□□□□ 0.04
HDAC4-204ENST00000446876 IQCDQ96DY2 449 aa15.29■□□□□ 0.04
HDAC4-204ENST00000446876 MTG2Q9H4K7 406 aa15.29■□□□□ 0.04
HDAC4-204ENST00000446876 MPP6Q9NZW5 540 aa15.29■□□□□ 0.04
HDAC4-204ENST00000446876 KIAA1522Q9P206 1035 aaPredicted RBP15.29■□□□□ 0.04
HDAC4-204ENST00000446876 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.29■□□□□ 0.04
HDAC4-204ENST00000446876 RIF1Q5UIP0 2472 aaKnown RBP15.29■□□□□ 0.04
HDAC4-204ENST00000446876 E9PAM4 449 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 NPC1O15118 1278 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 SRGAP2O75044 1071 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 RTN2O75298 545 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 ATP5BP06576 529 aaKnown RBP15.28■□□□□ 0.04
HDAC4-204ENST00000446876 GZMAP12544 262 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 ZNF143P52747 638 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-204ENST00000446876 MTA1Q13330 715 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 MAMLD1Q13495 774 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 STARD3Q14849 445 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 PLK5Q496M5 336 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 C5orf22Q49AR2 442 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 USP39Q53GS9 565 aaKnown RBP15.28■□□□□ 0.04
HDAC4-204ENST00000446876 SPECC1LQ69YQ0 1117 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 LAIR1Q6GTX8 287 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 PLEKHA7Q6IQ23 1121 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 KIAA1324Q6UXG2 1013 aaKnown RBP15.28■□□□□ 0.04
HDAC4-204ENST00000446876 TFAP2DQ7Z6R9 452 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 RUBCNQ92622 972 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 TTC17Q96AE7 1141 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 MYO19Q96H55 970 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 VCPIP1Q96JH7 1222 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 MRGPRX1Q96LB2 322 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 HAPLN3Q96S86 360 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 TRIM7Q9C029 511 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 MKRN2Q9H000 416 aaKnown RBP15.28■□□□□ 0.04
HDAC4-204ENST00000446876 RBSNQ9H1K0 784 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 TMEM245Q9H330 911 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 ARHGAP20Q9P2F6 1191 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 MYO1AQ9UBC5 1043 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 CNOT8Q9UFF9 292 aaKnown RBP15.28■□□□□ 0.04
HDAC4-204ENST00000446876 ADAMTS1Q9UHI8 967 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 MBD1Q9UIS9 605 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-204ENST00000446876 GMEB2Q9UKD1 530 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 PLA2G4CQ9UP65 541 aa15.28■□□□□ 0.04
HDAC4-204ENST00000446876 EP300Q09472 2414 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-204ENST00000446876 TNRC6BQ9UPQ9 1833 aaKnown RBP15.27■□□□□ 0.04
HDAC4-204ENST00000446876 A0A087X0T9 212 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-204ENST00000446876 ANKRD62A6NC57 917 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 SYNCRIPO60506 623 aaKnown RBP15.27■□□□□ 0.04
HDAC4-204ENST00000446876 FAM228BP0C875 321 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 ADRA1BP35368 520 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 P2RY2P41231 377 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 STK19P49842 368 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-204ENST00000446876 COPAP53621 1224 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 CDH4P55283 916 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 ZNF252P-AS1Q0IIN9 211 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 ZNF177Q13360 481 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-204ENST00000446876 MAP7D1Q3KQU3 841 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 PPP1R2P3Q6NXS1 205 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 SCYL2Q6P3W7 929 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 LRRC31Q6UY01 552 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 RPL10LQ96L21 214 aaKnown RBP15.27■□□□□ 0.04
HDAC4-204ENST00000446876 MRGPRX3Q96LB0 322 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 C1orf74Q96LT6 269 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 DUSP15Q9H1R2 295 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-204ENST00000446876 PARVAQ9NVD7 372 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 CYP8B1Q9UNU6 501 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 ERVW-1Q9UQF0 538 aa15.27■□□□□ 0.04
HDAC4-204ENST00000446876 BZW2Q9Y6E2 419 aaKnown RBP15.27■□□□□ 0.04
HDAC4-204ENST00000446876 NUP205Q92621 2012 aa15.27■□□□□ 0.03
HDAC4-204ENST00000446876 IGLV3-10A0A075B6K4 115 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 DRGXA6NNA5 263 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 TTC34A8MYJ7 566 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 FAM72CH0Y354 149 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 CLDN11O75508 207 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 MOCS3O95396 460 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 ASLP04424 464 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 PSMA2P25787 234 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 CCDC6Q16204 474 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 ARL13BQ3SXY8 428 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 FAM72AQ5TYM5 149 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 RNF219Q5W0B1 726 aaPredicted RBP15.26■□□□□ 0.03
HDAC4-204ENST00000446876 FAM72DQ6L9T8 149 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 TMC6Q7Z403 805 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 FAM72BQ86X60 149 aa15.26■□□□□ 0.03
HDAC4-204ENST00000446876 GAS2L3Q86XJ1 694 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms