RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 OR6Y1Q8NGX8 325 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 TDRD7Q8NHU6 1098 aaKnown RBP4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 ADAMTS15Q8TE58 950 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 ST8SIA4Q92187 359 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 ZUFSPQ96AP4 578 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 TRMT61AQ96FX7 289 aaKnown RBP4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 TTC14Q96N46 770 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 TWNKQ96RR1 684 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 MECRQ9BV79 373 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 AP1M1Q9BXS5 423 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 GPR63Q9BZJ6 419 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 TWSG1Q9GZX9 223 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 PAIP1Q9H074 479 aaKnown RBP4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 VPS16Q9H269 839 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 FBXO28Q9NVF7 368 aa4.93□□□□□ -1.62
HMGB1P48-201ENST00000446155 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 MANSC4A6NHS7 340 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 H0Y3Z8 333 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 UBE2Q2LH0YL09 131 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 PRYO14603 147 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 PPP6R2O75170 966 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 PRKCGP05129 697 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 HNRNPA1P09651 372 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 CYP2A6P11509 494 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 IGFBP2P18065 325 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 FBLP22087 321 aaKnown RBP4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 NDUFS1P28331 727 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 THBS4P35443 961 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 FOXL2P58012 376 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 NANOS3P60323 173 aaKnown RBP4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 MYBPC2Q14324 1141 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 SEC23BQ15437 767 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 P3H1Q32P28 736 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 ATPAF1Q5TC12 328 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 HAUS3Q68CZ6 603 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 ACAD10Q6JQN1 1059 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 TMEM65Q6PI78 240 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 SERPINA13PQ6UXR4 307 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 ZNF66Q6ZN08 573 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 BBS12Q6ZW61 710 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 RAB11FIP2Q7L804 512 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 LAS2Q8IYD9 372 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 C8orf58Q8NAV2 365 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 ZMIZ2Q8NF64 920 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 CEP70Q8NHQ1 597 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 CSGALNACT1Q8TDX6 532 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 P2RY11Q96G91 374 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 ZNF764Q96H86 408 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 FAR2Q96K12 515 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 CCDC17Q96LX7 622 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 TIGD1Q96MW7 591 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 TRAPPC9Q96Q05 1148 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 ASB2Q96Q27 587 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 EIF3CQ99613 913 aaKnown RBP4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 ELOVL1Q9BW60 279 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 ADGRE3Q9BY15 652 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 ABHD16BQ9H3Z7 469 aa4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 C19orf53Q9UNZ5 99 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P48-201ENST00000446155 AHCYL1O43865 530 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 GCATO75600 419 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 LARGE1O95461 756 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 CYP3A4P08684 503 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 CYP21A2P08686 494 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 CYP2D6P10635 497 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 RPL15P61313 204 aaKnown RBP4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 TLE3Q04726 772 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 SF3A3Q12874 501 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 ERV3-1Q14264 604 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 TSTQ16762 297 aaKnown RBP4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 SLC9C2Q5TAH2 1124 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 TMCO3Q6UWJ1 677 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 VSTM1Q6UX27 236 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 RRAGAQ7L523 313 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 ENOSF1Q7L5Y1 443 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 KRT27Q7Z3Y8 459 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 TMEM57Q8N5G2 664 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 PNLDC1Q8NA58 520 aaKnown RBP4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 AKAP1Q92667 903 aaKnown RBP eCLIP4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 ALDH8A1Q9H2A2 487 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 SH3GLB2Q9NR46 395 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 KRT84Q9NSB2 600 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 PI4KBQ9UBF8 816 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 VPS4AQ9UN37 437 aa4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 SIRT4Q9Y6E7 314 aaPredicted RBP4.91□□□□□ -1.62
HMGB1P48-201ENST00000446155 PI4KAP2A4QPH2 592 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 SYNDIG1LA6NDD5 238 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 CGB1A6NKQ9 187 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 DOK2O60496 412 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 TMEM63AO94886 807 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 KAT7O95251 611 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 STAT1P42224 750 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 POLD2P49005 469 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 AGTR2P50052 363 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 ZNF84P51523 738 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 DMWDQ09019 674 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 SLC10A2Q12908 348 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 CNGA3Q16281 694 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 CERKLQ49MI3 558 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 TMEM119Q4V9L6 283 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 RANBP10Q6VN20 620 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms