RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 OASLQ15646 514 aaKnown RBP16.98■□□□□ 0.31
TCOF1-206ENST00000445265 OLFML2BQ68BL8 750 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 GPC2Q8N158 579 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 ZNF786Q8N393 782 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 TBL1YQ9BQ87 522 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 SDCBP2Q9H190 292 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 CROTQ9UKG9 612 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 HBS1LQ9Y450 684 aaKnown RBP16.98■□□□□ 0.31
TCOF1-206ENST00000445265 AKAP11Q9UKA4 1901 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 ADGRA2Q96PE1 1338 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 CD48P09326 243 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 INSCQ1MX18 579 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 NMD3Q96D46 503 aaKnown RBP16.98■□□□□ 0.31
TCOF1-206ENST00000445265 RNF112Q9ULX5 631 aa16.98■□□□□ 0.31
TCOF1-206ENST00000445265 HDAC3O15379 428 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 PHGDHO43175 533 aaKnown RBP16.97■□□□□ 0.31
TCOF1-206ENST00000445265 MAGEC1O60732 1142 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 CLASP2O75122 1294 aaKnown RBP16.97■□□□□ 0.31
TCOF1-206ENST00000445265 CHRM3P20309 590 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 MSLNQ13421 630 aaPredicted RBP16.97■□□□□ 0.31
TCOF1-206ENST00000445265 VEPH1Q14D04 833 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 MARC1Q5VT66 337 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 ANGPTL8Q6UXH0 198 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 TMEM86AQ8N2M4 240 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 GCNAQ96QF7 691 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 NT5MQ9NPB1 228 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 ENTPD7Q9NQZ7 604 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 RCOR3Q9P2K3 495 aaPredicted RBP16.97■□□□□ 0.31
TCOF1-206ENST00000445265 TBC1D4O60343 1298 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 ADCYAP1R1P41586 468 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 FASTKQ14296 549 aaKnown RBP16.97■□□□□ 0.31
TCOF1-206ENST00000445265 LBRQ14739 615 aaKnown RBP16.97■□□□□ 0.31
TCOF1-206ENST00000445265 PCID2Q5JVF3 399 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 LBX2Q6XYB7 198 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 CRYGNQ8WXF5 182 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 RNPEPQ9H4A4 650 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 TRMT6Q9UJA5 497 aaKnown RBP16.97■□□□□ 0.31
TCOF1-206ENST00000445265 DERAQ9Y315 318 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 AP4S1Q9Y587 144 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 MDM4O15151 490 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 GLP2RO95838 553 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 RPLP2P05387 115 aaKnown RBP16.97■□□□□ 0.31
TCOF1-206ENST00000445265 CYP2C18P33260 490 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 HK2P52789 917 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 ARHGEF6Q15052 776 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 ECSITQ9BQ95 431 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 TKTL2Q9H0I9 626 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 PDGFCQ9NRA1 345 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 KIF17Q9P2E2 1029 aa16.97■□□□□ 0.31
TCOF1-206ENST00000445265 TIMM13Q9Y5L4 95 aaPredicted RBP16.97■□□□□ 0.31
TCOF1-206ENST00000445265 GOLGA8TH3BQL2 631 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 GPR141Q7Z602 305 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 DDX1Q92499 740 aaKnown RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 SLC25A23Q9BV35 468 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 ACE2Q9BYF1 805 aaPredicted RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 C12orf65Q9H3J6 166 aaKnown RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 BTBD7Q9P203 1132 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 RGSL1A5PLK6 1076 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 C2orf81A6NN90 581 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 STX7O15400 261 aaKnown RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 TM7SF2O76062 418 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 OR1G1P47890 313 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 SLC39A4Q6P5W5 647 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 RNF148Q8N7C7 305 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 B3GALNT2Q8NCR0 500 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 C10orf82Q8WW14 230 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 RBBP8Q99708 897 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 WDR41Q9HAD4 459 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 DMAP1Q9NPF5 467 aaPredicted RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 SNX15Q9NRS6 342 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 OR12D3Q9UGF7 316 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 RAP2CQ9Y3L5 183 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 ZC3H4Q9UPT8 1303 aaKnown RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 FAM95CA0A1B0GW59 222 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 NR5A2O00482 541 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 AHCYL1O43865 530 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 VPS26AO75436 327 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 MYO1DO94832 1006 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 FCGR1AP12314 374 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 CDH2P19022 906 aaPredicted RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 MGAT5BQ3V5L5 792 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 PTRHD1Q6GMV3 140 aaKnown RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 LRRC8BQ6P9F7 803 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 TNIP2Q8NFZ5 429 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 RDH11Q8TC12 318 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 PHF21BQ96EK2 531 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 P2RY11Q96G91 374 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 CSPG4P5Q96PW8 444 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 SEPT5Q99719 369 aaPredicted RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 A0A087X1B8 175 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 MRASO14807 208 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 MRPS22P82650 360 aaKnown RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 BLMHQ13867 455 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 UGT3A1Q6NUS8 523 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 PTAR1Q7Z6K3 402 aaPredicted RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 RELL1Q8IUW5 271 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 RBM15BQ8NDT2 890 aaKnown RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 ZNF512Q96ME7 567 aaPredicted RBP16.96■□□□□ 0.31
TCOF1-206ENST00000445265 LATS2Q9NRM7 1088 aa16.96■□□□□ 0.31
TCOF1-206ENST00000445265 RAD54BQ9Y620 910 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms