RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SPOPO43791 374 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 MTA2O94776 668 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 ASLP04424 464 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 CISD3P0C7P0 127 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 RHOQP17081 205 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 HLA-FP30511 346 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 CXCL12P48061 93 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 VAV2P52735 878 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 ZNF252P-AS1Q0IIN9 211 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 KRT81Q14533 505 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 C5orf22Q49AR2 442 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 PPP6R3Q5H9R7 873 aaPredicted RBP14.51□□□□□ -0.09
SSBP3-208ENST00000444533 RAD9BQ6WBX8 426 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 TFAP2DQ7Z6R9 452 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 C14orf80Q86SX3 495 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 CIR1Q86X95 450 aaPredicted RBP14.51□□□□□ -0.09
SSBP3-208ENST00000444533 C1orf210Q8IVY1 113 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 MAP7D3Q8IWC1 876 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.51□□□□□ -0.09
SSBP3-208ENST00000444533 TEKT4Q8WW24 435 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 SNRNP25Q9BV90 132 aaKnown RBP14.51□□□□□ -0.09
SSBP3-208ENST00000444533 IRF2BPLQ9H1B7 796 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 ANLNQ9NQW6 1124 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 ELOVL2Q9NXB9 296 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 VPS28Q9UK41 221 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 HPCAL4Q9UM19 191 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 STARD13Q9Y3M8 1113 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 SNX10Q9Y5X0 201 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 MYOFQ9NZM1 2061 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 CHURC1-FNTBB4DL54 471 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 H3BRJ5 948 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 ALDH1A2O94788 518 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 LRIG2O94898 1065 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 KLF8O95600 359 aaPredicted RBP14.5□□□□□ -0.09
SSBP3-208ENST00000444533 NTSR1P30989 418 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 GJC1P36383 396 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 MAPKAPK2P49137 400 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 LMAN2Q12907 356 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 MTAPQ13126 283 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 STARD3Q14849 445 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 TCEAL1Q15170 157 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 GEN1Q17RS7 908 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 FNDC3BQ53EP0 1204 aaKnown RBP14.5□□□□□ -0.09
SSBP3-208ENST00000444533 RAB6CQ53S08 254 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 MBLAC2Q68D91 279 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 ZNF783Q6ZMS7 281 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 Q6ZS52 159 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 ZNF354CQ86Y25 554 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 ZNF687Q8N1G0 1237 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 PHTF2Q8N3S3 785 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 KCTD6Q8NC69 237 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 USP33Q8TEY7 942 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 C2orf49Q9BVC5 232 aaPredicted RBP14.5□□□□□ -0.09
SSBP3-208ENST00000444533 RAB6CQ9H0N0 254 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 POLMQ9NP87 494 aaPredicted RBP14.5□□□□□ -0.09
SSBP3-208ENST00000444533 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.5□□□□□ -0.09
SSBP3-208ENST00000444533 MPP6Q9NZW5 540 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 SLC25A13Q9UJS0 675 aa14.5□□□□□ -0.09
SSBP3-208ENST00000444533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.5□□□□□ -0.09
SSBP3-208ENST00000444533 TRIOO75962 3097 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 BTNL10A8MVZ5 291 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 TRIM24O15164 1050 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 GALR2O43603 387 aaPredicted RBP14.49□□□□□ -0.09
SSBP3-208ENST00000444533 KRT86O43790 486 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 SYNCRIPO60506 623 aaKnown RBP14.49□□□□□ -0.09
SSBP3-208ENST00000444533 DLDP09622 509 aaKnown RBP14.49□□□□□ -0.09
SSBP3-208ENST00000444533 CCDC175P0C221 793 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 CD70P32970 193 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 NRLP54845 237 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 HADHBP55084 474 aaKnown RBP14.49□□□□□ -0.09
SSBP3-208ENST00000444533 FZD5Q13467 585 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 SMTNL2Q2TAL5 461 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 PITRM1Q5JRX3 1037 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 RNF43Q68DV7 783 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 SERPINA13PQ6UXR4 307 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 MAMSTRQ6ZN01 415 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 SYT13Q7L8C5 426 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 DAAM2Q86T65 1068 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 TMEM139Q8IV31 216 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 PYROXD2Q8N2H3 581 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 ALLCQ8N6M5 410 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 ACRBPQ8NEB7 543 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 MYEOVQ96EZ4 313 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 KCNH6Q9H252 994 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 TMEM248Q9NWD8 314 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 GPATCH2LQ9NWQ4 482 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 DLGAP2Q9P1A6 1054 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 CLEC4EQ9ULY5 219 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 MMP17Q9ULZ9 603 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 TBC1D30Q9Y2I9 924 aa14.49□□□□□ -0.09
SSBP3-208ENST00000444533 ILVBLA1L0T0 632 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 PRRT4C9JH25 899 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 I6L893 689 aaPredicted RBP14.48□□□□□ -0.09
SSBP3-208ENST00000444533 RAMP2O60895 175 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 CNTN5O94779 1100 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 HNRNPLP14866 589 aaKnown RBP eCLIP14.48□□□□□ -0.09
SSBP3-208ENST00000444533 CSKP41240 450 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 KIR2DL1P43626 348 aaPredicted RBP14.48□□□□□ -0.09
SSBP3-208ENST00000444533 DGKEP52429 567 aa14.48□□□□□ -0.09
SSBP3-208ENST00000444533 ECT2LQ008S8 904 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms