RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 DSG3P32926 999 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 CASP2P42575 452 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 PMS2P3Q13401 168 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 FAXCQ5TGI0 409 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 STRA8Q7Z7C7 330 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 OR2T34Q8NGX1 318 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 OR2T3Q8NH03 318 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 CENPNQ96H22 339 aaPredicted RBP5.12□□□□□ -1.59
HERC1-201ENST00000443617 A0A1W2PPW3 197 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 ALBP02768 609 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 TCEA1P23193 301 aaKnown RBP5.12□□□□□ -1.59
HERC1-201ENST00000443617 KCNJ8Q15842 424 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 SMUG1Q53HV7 270 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 DDX1Q92499 740 aaKnown RBP5.12□□□□□ -1.59
HERC1-201ENST00000443617 LRRC39Q96DD0 335 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 ATXN7L3BQ96GX2 97 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 GPRC5CQ9NQ84 441 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 HTRA2O43464 458 aaPredicted RBP5.12□□□□□ -1.59
HERC1-201ENST00000443617 CCDC159P0C7I6 412 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 BMP2P12643 396 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 GARTP22102 1010 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 YWHABP31946 246 aaKnown RBP5.12□□□□□ -1.59
HERC1-201ENST00000443617 KCNQ4P56696 695 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 INSCQ1MX18 579 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 PRMT9Q6P2P2 845 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 INTS5Q6P9B9 1019 aaKnown RBP5.12□□□□□ -1.59
HERC1-201ENST00000443617 C12orf56Q8IXR9 622 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 SLC29A1Q99808 456 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 NOL6Q9H6R4 1146 aaKnown RBP5.12□□□□□ -1.59
HERC1-201ENST00000443617 TRPV5Q9NQA5 729 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 SMYD2Q9NRG4 433 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 PCDHGB4Q9UN71 923 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 PCDHGB5Q9Y5G0 923 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 TPP1O14773 563 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 ADAM23O75077 832 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 MFN2O95140 757 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 STMN1P16949 149 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 PGAM1P18669 254 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 MIPP30301 263 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 GDF10P55107 478 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 VAC14Q08AM6 782 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 TIGD2Q4W5G0 525 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 C4orf22Q6V702 233 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 MAVSQ7Z434 540 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 NAT8LQ8N9F0 302 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 MRGBPQ9NV56 204 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 AP3B1O00203 1094 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 EDIL3O43854 480 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 TIPRLO75663 272 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 SULT1C4O75897 302 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 LDLRP01130 860 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 JAK3P52333 1124 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 DEFA1P59665 94 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 DEFA3P59666 94 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 SQLEQ14534 574 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 LAYNQ6UX15 382 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 OR7G1Q8NGA0 311 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 PNPLA8Q9NP80 782 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 TEKT2Q9UIF3 430 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 RNF11Q9Y3C5 154 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 PCDHB12Q9Y5F1 795 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 TNFRSF10AO00220 468 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 SNPHO15079 494 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 MYCLP12524 364 aaPredicted RBP5.12□□□□□ -1.59
HERC1-201ENST00000443617 KCNA2P16389 499 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 CYP2A13Q16696 494 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 ZSWIM2Q8NEG5 633 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 POPDC2Q9HBU9 364 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 TTLL3Q9Y4R7 772 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 ANKRD34BA5PLL1 514 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 SPRP35270 261 aaPredicted RBP5.12□□□□□ -1.59
HERC1-201ENST00000443617 RALGDSQ12967 914 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 OXA1LQ15070 435 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 PPP4R4Q6NUP7 873 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 CDHR3Q6ZTQ4 885 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 KRT27Q7Z3Y8 459 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 ANKFN1Q8N957 763 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 TOP1MTQ969P6 601 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 DEPDC7Q96QD5 511 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 RIT2Q99578 217 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 CAB39Q9Y376 341 aaPredicted RBP5.12□□□□□ -1.59
HERC1-201ENST00000443617 MYPNQ86TC9 1320 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 FAM47E-STBD1D6RA91 191 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 APOC4-APOC2K7ER74 178 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 MEIS2O14770 477 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 APOC2P02655 101 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 TCF7P36402 384 aaPredicted RBP5.12□□□□□ -1.59
HERC1-201ENST00000443617 FGD3Q5JSP0 725 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 TBCELQ5QJ74 424 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 RNF111Q6ZNA4 994 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 NPAS2Q99743 824 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 SLC25A23Q9BV35 468 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 CDC14AQ9UNH5 594 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 NINQ8N4C6 2090 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 LOC102724428A0A0B4J2F2 783 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 DHRS12A0PJE2 317 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 TGM2P21980 687 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 MYF6P23409 242 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 ATICP31939 592 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 SIK1P57059 783 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms