RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ZNF564Q8TBZ8 553 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-211ENST00000443563 ATRIPQ8WXE1 791 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 MYEOVQ96EZ4 313 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 EIF3CQ99613 913 aaKnown RBP11.16□□□□□ -0.62
HDAC6-211ENST00000443563 EPAS1Q99814 870 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 GABRG3Q99928 467 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 ANLNQ9NQW6 1124 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 ZSCAN32Q9NX65 697 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 DONSONQ9NYP3 566 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 CTTNBP2NLQ9P2B4 639 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 THAP10Q9P2Z0 257 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-211ENST00000443563 ANAPC7Q9UJX3 599 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 INTUQ9ULD6 942 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 FZD10Q9ULW2 581 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 PCDHGA2Q9Y5H1 932 aa11.16□□□□□ -0.62
HDAC6-211ENST00000443563 DMDP11532 3685 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 MYO15AQ9UKN7 3530 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 CACNA1IQ9P0X4 2223 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 FANCMQ8IYD8 2048 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 I6L893 689 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-211ENST00000443563 K7ESF4 209 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 SGK1O00141 431 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 SYNCRIPO60506 623 aaKnown RBP11.15□□□□□ -0.62
HDAC6-211ENST00000443563 SRPRAP08240 638 aaKnown RBP11.15□□□□□ -0.62
HDAC6-211ENST00000443563 DLDP09622 509 aaKnown RBP11.15□□□□□ -0.62
HDAC6-211ENST00000443563 TDGF1P13385 188 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 HOXB2P14652 356 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 OR1E1P30953 314 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 L1CAMP32004 1257 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 CD70P32970 193 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 CNR2P34972 360 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 GGCXP38435 758 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 NNMTP40261 264 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 ZNF135P52742 658 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-211ENST00000443563 PLK1P53350 603 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 SPA17Q15506 151 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 FNDC3BQ53EP0 1204 aaKnown RBP11.15□□□□□ -0.62
HDAC6-211ENST00000443563 RAB6CQ53S08 254 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 FSCBQ5H9T9 825 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 PITRM1Q5JRX3 1037 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 ERMARDQ5T6L9 678 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 RNF219Q5W0B1 726 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-211ENST00000443563 TMEM215Q68D42 235 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 TSSK4Q6SA08 328 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 ZNF783Q6ZMS7 281 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 ADIPOR2Q86V24 386 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 WDR5BQ86VZ2 330 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 CIR1Q86X95 450 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-211ENST00000443563 RHOT2Q8IXI1 618 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 KDM1BQ8NB78 822 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 WFDC5Q8TCV5 224 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 NELL1Q92832 810 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 TTC17Q96AE7 1141 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 TBC1D31Q96DN5 1066 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 ARHGEF26Q96DR7 871 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 LMLNQ96KR4 655 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 RAB6CQ9H0N0 254 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 SEMA4AQ9H3S1 761 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 TMPRSS4Q9NRS4 437 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 SPTLC3Q9NUV7 552 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 EBF1Q9UH73 591 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 TBC1D30Q9Y2I9 924 aa11.15□□□□□ -0.62
HDAC6-211ENST00000443563 MUC22E2RYF6 1773 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-211ENST00000443563 ILVBLA1L0T0 632 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 ADAM23O75077 832 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 LRCH4O75427 683 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 LCA5LO95447 670 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 RHOCP08134 193 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 CHRM1P11229 460 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-211ENST00000443563 RHOQP17081 205 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 FECHP22830 423 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 MIPP30301 263 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 ETFBP38117 255 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 CSKP41240 450 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 NBL1P41271 181 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 MAGEA1P43355 309 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 MAPKAPK2P49137 400 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 GSDMDP57764 484 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 KRT83P78385 493 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 ECT2LQ008S8 904 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 ZNF252P-AS1Q0IIN9 211 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 ENPP2Q13822 863 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 ZNF234Q14588 700 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 HADHQ16836 314 aaKnown RBP11.14□□□□□ -0.63
HDAC6-211ENST00000443563 PLEKHG6Q3KR16 790 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 FUT11Q495W5 492 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 BOLA3Q53S33 107 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 MANEALQ5VSG8 457 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 CXorf57Q6NSI4 855 aaKnown RBP11.14□□□□□ -0.63
HDAC6-211ENST00000443563 RWDD4Q6NW29 188 aaKnown RBP11.14□□□□□ -0.63
HDAC6-211ENST00000443563 SERPINA13PQ6UXR4 307 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 ZBTB44Q8NCP5 570 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 HHIPQ96QV1 700 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 TRIM7Q9C029 511 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 MUC3BQ9H195 1237 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 CATSPERBQ9H7T0 1116 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 FBRSQ9HAH7 460 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 CACNA2D2Q9NY47 1150 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 SUN2Q9UH99 717 aa11.14□□□□□ -0.63
HDAC6-211ENST00000443563 PCSK1NQ9UHG2 260 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms