RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 CRTAC1Q9NQ79 661 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 KLC4Q9NSK0 619 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 GMIPQ9P107 970 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 AFF4Q9UHB7 1163 aaKnown RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 EIF4E1BA6NMX2 242 aaKnown RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 HACD1B0YJ81 288 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 SPECC1L-ADORA2AF8WAN1 911 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 PHGDHO43175 533 aaKnown RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 F7P08709 466 aaPredicted RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 KCNE1P15382 129 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 SELPP16109 830 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 IKBKEQ14164 716 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 UGP2Q16851 508 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 CERCAMQ5T4B2 595 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 TRABD2AQ86V40 505 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 KCNMB4Q86W47 210 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 PSTKQ8IV42 348 aaKnown RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 ZNF75CPQ92670 426 aaPredicted RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 TMEM209Q96SK2 561 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 ACBD6Q9BR61 282 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 WWP1Q9H0M0 922 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 SLC17A7Q9P2U7 560 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 SSC5DA1L4H1 1573 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 ZBTB24O43167 697 aaPredicted RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 PSMD3O43242 534 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 TLR5O60602 858 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 LRG1P02750 347 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 GFAPP14136 432 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 ECHS1P30084 290 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 CSE1LP55060 971 aaKnown RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 GJA9P57773 515 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 POU5F1Q01860 360 aaKnown RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 MOGSQ13724 837 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 UNC5AQ6ZN44 842 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 ANKS1BQ7Z6G8 1248 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 ZNF280BQ86YH2 543 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 EBNA1BP2Q99848 306 aaKnown RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 NDFIP2Q9NV92 336 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 SYBUQ9NX95 663 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 VPS28Q9UK41 221 aa10.84□□□□□ -0.67
CALD1-210ENST00000443197 LSM7Q9UK45 103 aaKnown RBP10.84□□□□□ -0.67
CALD1-210ENST00000443197 C9IYK1 514 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 PTGESO14684 152 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 SCTRP47872 440 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 ITGA9Q13797 1035 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 VARS2Q5ST30 1063 aaKnown RBP10.83□□□□□ -0.68
CALD1-210ENST00000443197 TIGD7Q6NT04 549 aaPredicted RBP10.83□□□□□ -0.68
CALD1-210ENST00000443197 PRSS55Q6UWB4 352 aaPredicted RBP10.83□□□□□ -0.68
CALD1-210ENST00000443197 SPATA22Q8NHS9 363 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 MECRQ9BV79 373 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 CNTN6Q9UQ52 1028 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 RUVBL2Q9Y230 463 aaKnown RBP10.83□□□□□ -0.68
CALD1-210ENST00000443197 Q9Y3F1 56 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 A8MX80 341 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 NDUFS3O75489 264 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 RHOCP08134 193 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 MYL4P12829 197 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 CYP2C18P33260 490 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 GATMP50440 423 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 RENBPP51606 427 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 KLF1Q13351 362 aaPredicted RBP10.83□□□□□ -0.68
CALD1-210ENST00000443197 OLIG2Q13516 323 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 LPIN1Q14693 890 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 OASLQ15646 514 aaKnown RBP10.83□□□□□ -0.68
CALD1-210ENST00000443197 MSS51Q4VC12 460 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 ZNF470Q6ECI4 717 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 DENND1CQ8IV53 801 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 SMOQ99835 787 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 FTHL17Q9BXU8 183 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 DLEC1Q9Y238 1755 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 CDH5P33151 784 aaPredicted RBP10.83□□□□□ -0.68
CALD1-210ENST00000443197 AQP5P55064 265 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 OXCT1P55809 520 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 ART3Q13508 389 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 ZRANB3Q5FWF4 1079 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 CIR1Q86X95 450 aaPredicted RBP10.83□□□□□ -0.68
CALD1-210ENST00000443197 CCNJLQ8IV13 435 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 CKAP2Q8WWK9 683 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 UROC1Q96N76 676 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 TTC1Q99614 292 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 ATP13A1Q9HD20 1204 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 ADAM28Q9UKQ2 775 aa10.83□□□□□ -0.68
CALD1-210ENST00000443197 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.83□□□□□ -0.68
CALD1-210ENST00000443197 LRRC37AA6NMS7 1700 aa10.82□□□□□ -0.68
CALD1-210ENST00000443197 RBM47A0AV96 593 aaKnown RBP10.82□□□□□ -0.68
CALD1-210ENST00000443197 MT-CO1P00395 513 aa10.82□□□□□ -0.68
CALD1-210ENST00000443197 PGAM1P18669 254 aa10.82□□□□□ -0.68
CALD1-210ENST00000443197 SP100P23497 879 aaPredicted RBP10.82□□□□□ -0.68
CALD1-210ENST00000443197 KLRC2P26717 231 aa10.82□□□□□ -0.68
CALD1-210ENST00000443197 ATP5C1P36542 298 aaKnown RBP10.82□□□□□ -0.68
CALD1-210ENST00000443197 PDAP1Q13442 181 aaKnown RBP10.82□□□□□ -0.68
CALD1-210ENST00000443197 SIX1Q15475 284 aaPredicted RBP10.82□□□□□ -0.68
CALD1-210ENST00000443197 TRMT10BQ6PF06 316 aaKnown RBP10.82□□□□□ -0.68
CALD1-210ENST00000443197 MON1AQ86VX9 555 aa10.82□□□□□ -0.68
CALD1-210ENST00000443197 IFNLR1Q8IU57 520 aaPredicted RBP10.82□□□□□ -0.68
CALD1-210ENST00000443197 SPATA6LQ8N4H0 392 aa10.82□□□□□ -0.68
CALD1-210ENST00000443197 GPR63Q9BZJ6 419 aa10.82□□□□□ -0.68
CALD1-210ENST00000443197 TBC1D13Q9NVG8 400 aa10.82□□□□□ -0.68
CALD1-210ENST00000443197 GDAP2Q9NXN4 497 aa10.82□□□□□ -0.68
CALD1-210ENST00000443197 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms