RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 TPMTP51580 245 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 ATP11AP98196 1134 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 ZNF33AQ06730 810 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 CLEC16AQ2KHT3 1053 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 PLEKHG6Q3KR16 790 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 IL31Q6EBC2 164 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 ERMP1Q7Z2K6 904 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 C14orf80Q86SX3 495 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 FAM124AQ86V42 546 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 SYT12Q8IV01 421 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 APCDD1Q8J025 514 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 FUCA2Q9BTY2 467 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 RTN4Q9NQC3 1192 aaKnown RBP21.72■■□□□ 1.07
CDKN3-204ENST00000442975 PRSS16Q9NQE7 514 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 ANLNQ9NQW6 1124 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 ARHGEF38Q9NXL2 777 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 TMEM59LQ9UK28 342 aa21.72■■□□□ 1.07
CDKN3-204ENST00000442975 LNP1A1A4G5 178 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 GJB6O95452 261 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 CFIP05156 583 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 CDO1Q16878 200 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 TRIM61Q5EBN2 209 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 STPG1Q5TH74 334 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 FAM131BQ86XD5 332 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 NT5C3BQ969T7 300 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 PGAP3Q96FM1 320 aaPredicted RBP21.71■■□□□ 1.07
CDKN3-204ENST00000442975 TMPRSS4Q9NRS4 437 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 TMEM74BQ9NUR3 256 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 ADAM22Q9P0K1 906 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 ERVW-1Q9UQF0 538 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 MYO18AQ92614 2054 aaKnown RBP21.71■■□□□ 1.07
CDKN3-204ENST00000442975 SPAG17Q6Q759 2223 aa21.71■■□□□ 1.07
CDKN3-204ENST00000442975 MUC22E2RYF6 1773 aaPredicted RBP21.7■■□□□ 1.06
CDKN3-204ENST00000442975 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.7■■□□□ 1.06
CDKN3-204ENST00000442975 MEI4A8MW99 385 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 SERPINC1P01008 464 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 FERP16591 822 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 MZF1P28698 734 aaPredicted RBP21.7■■□□□ 1.06
CDKN3-204ENST00000442975 STK19P49842 368 aaPredicted RBP21.7■■□□□ 1.06
CDKN3-204ENST00000442975 TPM4P67936 248 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 ECT2LQ008S8 904 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 ZNF177Q13360 481 aaPredicted RBP21.7■■□□□ 1.06
CDKN3-204ENST00000442975 CXorf57Q6NSI4 855 aaKnown RBP21.7■■□□□ 1.06
CDKN3-204ENST00000442975 METTL3Q86U44 580 aaKnown RBP21.7■■□□□ 1.06
CDKN3-204ENST00000442975 SLC41A1Q8IVJ1 513 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 RGL4Q8IZJ4 473 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 MYO19Q96H55 970 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 RPL10LQ96L21 214 aaKnown RBP21.7■■□□□ 1.06
CDKN3-204ENST00000442975 MRGPRX3Q96LB0 322 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 AGPAT1Q99943 283 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 GPR174Q9BXC1 333 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 FBRSQ9HAH7 460 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 CBX8Q9HC52 389 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 ITM2CQ9NQX7 267 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 SUN2Q9UH99 717 aa21.7■■□□□ 1.06
CDKN3-204ENST00000442975 CACNA1AO00555 2505 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 I6L893 689 aaPredicted RBP21.69■■□□□ 1.06
CDKN3-204ENST00000442975 SIN3BO75182 1162 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 CCDC172P0C7W6 258 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 UNGP13051 313 aaPredicted RBP21.69■■□□□ 1.06
CDKN3-204ENST00000442975 PTMSP20962 102 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 OXTRP30559 389 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 SDC4P31431 198 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 DPP6P42658 865 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 OXCT1P55809 520 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 SLC12A1Q13621 1099 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 IQCB1Q15051 598 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 HNRNPA1L2Q32P51 320 aaKnown RBP21.69■■□□□ 1.06
CDKN3-204ENST00000442975 ZNF776Q68DI1 518 aaPredicted RBP21.69■■□□□ 1.06
CDKN3-204ENST00000442975 LRRC31Q6UY01 552 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 LUZP1Q86V48 1076 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 RXFP2Q8WXD0 754 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 FOXJ1Q92949 421 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 NUSAP1Q9BXS6 441 aaKnown RBP21.69■■□□□ 1.06
CDKN3-204ENST00000442975 VPS28Q9UK41 221 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 PILRBQ9UKJ0 227 aa21.69■■□□□ 1.06
CDKN3-204ENST00000442975 TTC34A8MYJ7 566 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 CLDN11O75508 207 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 CNTN5O94779 1100 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 DNTTP04053 509 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 CALB1P05937 261 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 SRPRAP08240 638 aaKnown RBP21.68■■□□□ 1.06
CDKN3-204ENST00000442975 HOXD12P35452 270 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 LIMK1P53667 647 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 RPS14P62263 151 aaKnown RBP21.68■■□□□ 1.06
CDKN3-204ENST00000442975 C15orf59Q2T9L4 293 aaPredicted RBP21.68■■□□□ 1.06
CDKN3-204ENST00000442975 TTC31Q49AM3 519 aaPredicted RBP21.68■■□□□ 1.06
CDKN3-204ENST00000442975 SYCP2LQ5T4T6 812 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 TFAP2DQ7Z6R9 452 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 JOSD2Q8TAC2 188 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 SELENOOQ9BVL4 669 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 MUC3BQ9H195 1237 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 WSB2Q9NYS7 404 aaPredicted RBP21.68■■□□□ 1.06
CDKN3-204ENST00000442975 EVLQ9UI08 416 aaPredicted RBP21.68■■□□□ 1.06
CDKN3-204ENST00000442975 SLCO3A1Q9UIG8 710 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 ABCA7Q8IZY2 2146 aa21.68■■□□□ 1.06
CDKN3-204ENST00000442975 A0A1B0GTH6 734 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 EDDM13A0A1B0GTR0 161 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 LRRC53A6NM62 1247 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 RHOCP08134 193 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms