RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 INIPQ9NRY2 104 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 PAK5Q9P286 719 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 VPS28Q9UK41 221 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 EMCNQ9ULC0 261 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 PCDHGC3Q9UN70 934 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 CNTNAP2Q9UHC6 1331 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 LOC285556D6RIA3 1793 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 K7ERI5 159 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 ADCY6O43306 1168 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 DCXO43602 365 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 TOP3BO95985 862 aaKnown RBP12.19□□□□□ -0.46
LTBR-203ENST00000441074 ASS1P00966 412 aaKnown RBP12.19□□□□□ -0.46
LTBR-203ENST00000441074 ZNF286BP0CG31 522 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 PSMC3P17980 439 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 CNTFP26441 200 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 POLR2BP30876 1174 aaKnown RBP12.19□□□□□ -0.46
LTBR-203ENST00000441074 MLH1P40692 756 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 CD151P48509 253 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 MRPS22P82650 360 aaKnown RBP12.19□□□□□ -0.46
LTBR-203ENST00000441074 PDAP1Q13442 181 aaKnown RBP12.19□□□□□ -0.46
LTBR-203ENST00000441074 NOMO1Q15155 1222 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 PDCD4Q53EL6 469 aaKnown RBP12.19□□□□□ -0.46
LTBR-203ENST00000441074 UNC5AQ6ZN44 842 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 WDR49Q8IV35 697 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 LILRA2Q8N149 483 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 CMASQ8NFW8 434 aaPredicted RBP12.19□□□□□ -0.46
LTBR-203ENST00000441074 NLRP7Q8WX94 980 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 SLC7A3Q8WY07 619 aa12.19□□□□□ -0.46
LTBR-203ENST00000441074 PRSS51A0A1B0GVH4 220 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 SLC15A5A6NIM6 579 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 ZBTB42B2RXF5 422 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 H0YJX3 145 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 PLIN3O60664 434 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 GLRA3O75311 464 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 SNAI1O95863 264 aaPredicted RBP12.18□□□□□ -0.46
LTBR-203ENST00000441074 TGFB3P10600 412 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 RFC1P35251 1148 aaPredicted RBP12.18□□□□□ -0.46
LTBR-203ENST00000441074 HARS2P49590 506 aaKnown RBP12.18□□□□□ -0.46
LTBR-203ENST00000441074 BTG3Q14201 252 aaPredicted RBP12.18□□□□□ -0.46
LTBR-203ENST00000441074 FLOT2Q14254 428 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 TAF1CQ15572 869 aaPredicted RBP12.18□□□□□ -0.46
LTBR-203ENST00000441074 ZNF792Q3KQV3 632 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 ZBTB41Q5SVQ8 909 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 N4BP2L1Q5TBK1 243 aaPredicted RBP12.18□□□□□ -0.46
LTBR-203ENST00000441074 SCARA3Q6AZY7 606 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 TAPT1Q6NXT6 567 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 C16orf46Q6P387 395 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 C16orf89Q6UX73 402 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 CDR2LQ86X02 465 aaPredicted RBP12.18□□□□□ -0.46
LTBR-203ENST00000441074 BRSK2Q8IWQ3 736 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 CHERPQ8IWX8 916 aaKnown RBP12.18□□□□□ -0.46
LTBR-203ENST00000441074 GALNT4Q8N4A0 578 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 GSDMBQ8TAX9 411 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 DLG3Q92796 817 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 OXCT2Q9BYC2 517 aaPredicted RBP12.18□□□□□ -0.46
LTBR-203ENST00000441074 NIF3L1Q9GZT8 377 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 MAF1Q9H063 256 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 TMEM134Q9H6X4 195 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 PFDN4Q9NQP4 134 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 ADGRA2Q96PE1 1338 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 A0A0G2JMZ2 1700 aa12.18□□□□□ -0.46
LTBR-203ENST00000441074 ZBTB14O43829 449 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 MAGEA6P43360 314 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 STT3AP46977 705 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 YWHAEP62258 255 aaKnown RBP12.17□□□□□ -0.46
LTBR-203ENST00000441074 TXNL4AP83876 142 aaKnown RBP12.17□□□□□ -0.46
LTBR-203ENST00000441074 GSTM4Q03013 218 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 PCLAFQ15004 111 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 CYP4A22Q5TCH4 519 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 VWA5B1Q5TIE3 1220 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 METTL21CQ5VZV1 264 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 ATG14Q6ZNE5 492 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 REM2Q8IYK8 340 aaPredicted RBP12.17□□□□□ -0.46
LTBR-203ENST00000441074 WDTC1Q8N5D0 677 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 OR5B17Q8NGF7 314 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 NPLOC4Q8TAT6 608 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 TMIGD2Q96BF3 282 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 PKP2Q99959 881 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 NUF2Q9BZD4 464 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 HAPLN2Q9GZV7 340 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 RSAD1Q9HA92 442 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 ITGB1BP2Q9UKP3 347 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 KRT3P12035 628 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 PHKA2P46019 1235 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 ENTPD1P49961 510 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 OXCT1P55809 520 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 ABCE1P61221 599 aaKnown RBP12.17□□□□□ -0.46
LTBR-203ENST00000441074 TUBA4AP68366 448 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 PDK1Q15118 436 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 ZNF423Q2M1K9 1284 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 TRMT10BQ6PF06 316 aaKnown RBP12.17□□□□□ -0.46
LTBR-203ENST00000441074 MAMDC4Q6UXC1 1216 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 KIAA0319LQ8IZA0 1049 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 LZTR1Q8N653 840 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 MCUQ8NE86 351 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 DQX1Q8TE96 717 aaKnown RBP12.17□□□□□ -0.46
LTBR-203ENST00000441074 GIPC3Q8TF64 312 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 LIN28AQ9H9Z2 209 aaKnown RBP12.17□□□□□ -0.46
LTBR-203ENST00000441074 IGSF9Q9P2J2 1179 aa12.17□□□□□ -0.46
LTBR-203ENST00000441074 DCDC2Q9UHG0 476 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms