RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 TCRBV5S1A1TA0A578 114 aa24.38■■□□□ 1.49
VARS-217ENST00000440048 SIGLEC16A6NMB1 481 aa24.38■■□□□ 1.49
VARS-217ENST00000440048 EPN2O95208 641 aa24.38■■□□□ 1.49
VARS-217ENST00000440048 SDHBP21912 280 aa24.38■■□□□ 1.49
VARS-217ENST00000440048 PTPN9P43378 593 aa24.38■■□□□ 1.49
VARS-217ENST00000440048 FOXK2Q01167 660 aa24.38■■□□□ 1.49
VARS-217ENST00000440048 KLHL30Q0D2K2 578 aa24.38■■□□□ 1.49
VARS-217ENST00000440048 CDO1Q16878 200 aa24.38■■□□□ 1.49
VARS-217ENST00000440048 SH3PXD2AQ5TCZ1 1133 aa24.38■■□□□ 1.49
VARS-217ENST00000440048 PMS2CLQ68D20 193 aa24.38■■□□□ 1.49
VARS-217ENST00000440048 ZNF683Q8IZ20 524 aa24.38■■□□□ 1.49
VARS-217ENST00000440048 MBD1Q9UIS9 605 aaPredicted RBP24.38■■□□□ 1.49
VARS-217ENST00000440048 DCHS1Q96JQ0 3298 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 MOCS3O95396 460 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 ASLP04424 464 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 SKILP12757 684 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 PLEKHG6Q3KR16 790 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 CXorf57Q6NSI4 855 aaKnown RBP24.37■■□□□ 1.49
VARS-217ENST00000440048 DNAJC24Q6P3W2 148 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 WDR59Q6PJI9 974 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 KIAA1324Q6UXG2 1013 aaKnown RBP24.37■■□□□ 1.49
VARS-217ENST00000440048 APCDD1Q8J025 514 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 ZNF366Q8N895 744 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 C1orf74Q96LT6 269 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 HAPLN3Q96S86 360 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 XPO4Q9C0E2 1151 aaKnown RBP24.37■■□□□ 1.49
VARS-217ENST00000440048 MKRN2Q9H000 416 aaKnown RBP24.37■■□□□ 1.49
VARS-217ENST00000440048 ARRDC1-AS1Q9H2J1 176 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 NUP205Q92621 2012 aa24.37■■□□□ 1.49
VARS-217ENST00000440048 DOCK4Q8N1I0 1966 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 CEP192Q8TEP8 1941 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 TMCO5BA8MYB1 307 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 PRR5-ARHGAP8B1AHC4 643 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 FOXD2O60548 495 aaPredicted RBP24.36■■□□□ 1.49
VARS-217ENST00000440048 GPD1P21695 349 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 RRM1P23921 792 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 MZF1P28698 734 aaPredicted RBP24.36■■□□□ 1.49
VARS-217ENST00000440048 CTSOP43234 321 aaPredicted RBP24.36■■□□□ 1.49
VARS-217ENST00000440048 ARHGAP8P85298 464 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 LMNB2Q03252 620 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 CAMK2GQ13555 558 aaPredicted RBP24.36■■□□□ 1.49
VARS-217ENST00000440048 SLC12A1Q13621 1099 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 ACBD5Q5T8D3 534 aaPredicted RBP24.36■■□□□ 1.49
VARS-217ENST00000440048 PPP1R2P3Q6NXS1 205 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 STRADAQ7RTN6 431 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 ERMP1Q7Z2K6 904 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 CENPIQ92674 756 aaPredicted RBP24.36■■□□□ 1.49
VARS-217ENST00000440048 MYO19Q96H55 970 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 VCPIP1Q96JH7 1222 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 MRGPRX3Q96LB0 322 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 PRDM16Q9HAZ2 1276 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 USP18Q9UMW8 372 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 GON4LQ3T8J9 2241 aa24.36■■□□□ 1.49
VARS-217ENST00000440048 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.35■■□□□ 1.49
VARS-217ENST00000440048 DDX3XO00571 662 aaKnown RBP eCLIP24.35■■□□□ 1.49
VARS-217ENST00000440048 MAP3K13O43283 966 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 ZNF217O75362 1048 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 CLDN11O75508 207 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 CNTN5O94779 1100 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 COPAP53621 1224 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 OXCT1P55809 520 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 ZNF177Q13360 481 aaPredicted RBP24.35■■□□□ 1.49
VARS-217ENST00000440048 PPP1R15BQ5SWA1 713 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 ARTNQ5T4W7 220 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 LRRC31Q6UY01 552 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 TMPRSS6Q8IU80 811 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 FAM172AQ8WUF8 416 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 CPLX3Q8WVH0 158 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 CD93Q9NPY3 652 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 SEMA4GQ9NTN9 838 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 CAPN11Q9UMQ6 739 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 ERVW-1Q9UQF0 538 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 PCDHGA5Q9Y5G8 931 aa24.35■■□□□ 1.49
VARS-217ENST00000440048 IGHV1OR15-9A0A0B4J2B8 117 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 DRGXA6NNA5 263 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 NUMBP49757 651 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 PLK1P53350 603 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 CDH4P55283 916 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 HDAC4P56524 1084 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 ST8SIA6P61647 398 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 RPL7AP62424 266 aaKnown RBP24.34■■□□□ 1.49
VARS-217ENST00000440048 ZBED6P86452 979 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 ECT2LQ008S8 904 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 ALFQ53S48 1182 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 DNAAF5Q86Y56 855 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 OR52K2Q8NGK3 314 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 OR2T3Q8NH03 318 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 SYN2Q92777 582 aaPredicted RBP24.34■■□□□ 1.49
VARS-217ENST00000440048 IQCDQ96DY2 449 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 MCEEQ96PE7 176 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 SUN2Q9UH99 717 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 CYP8B1Q9UNU6 501 aa24.34■■□□□ 1.49
VARS-217ENST00000440048 IGLV3-10A0A075B6K4 115 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 E9PAM4 449 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 TPM3P06753 285 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 SRPRAP08240 638 aaKnown RBP24.33■■□□□ 1.49
VARS-217ENST00000440048 GZMAP12544 262 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 ADRA1BP35368 520 aa24.33■■□□□ 1.49
VARS-217ENST00000440048 PUM1Q14671 1186 aaKnown RBP eCLIP24.33■■□□□ 1.491e-7■□□□□ 10.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms