RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 CYP11B1P15538 503 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 NOS2P35228 1153 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 SCNN1AP37088 669 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 ANP32AP39687 249 aaKnown RBP16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 AFF3P51826 1226 aaKnown RBP16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 OXCT1P55809 520 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 ECT2LQ008S8 904 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 KCNMA1Q12791 1236 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 RAPGEF1Q13905 1077 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 DRAP1Q14919 205 aaPredicted RBP16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 TCP11X2Q5H9J9 407 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 C9orf64Q5T6V5 341 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 RNF219Q5W0B1 726 aaPredicted RBP16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 IL27RAQ6UWB1 636 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 CCAR2Q8N163 923 aaKnown RBP16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 TMEM35BQ8NCS4 154 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 RNF34Q969K3 372 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 NAA15Q9BXJ9 866 aaKnown RBP16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 PABPC3Q9H361 631 aaKnown RBP16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 MTG2Q9H4K7 406 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 OSGEPQ9NPF4 335 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 SAMSN1Q9NSI8 373 aaKnown RBP16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 LMBRD1Q9NUN5 540 aa16.8■□□□□ 0.28
SNRPD3-204ENST00000439775 ADAMTS9Q9P2N4 1935 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 SYNJ2BP-COX16A0A087WUM0 186 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 EDDM13A0A1B0GTR0 161 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 ZNF883P0CG24 379 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 UCHL3P15374 230 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 MATKP42679 507 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 CTSOP43234 321 aaPredicted RBP16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 GABRB2P47870 512 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 PLK1P53350 603 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 SULT2A1Q06520 285 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 SFSWAPQ12872 951 aaKnown RBP16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 FOXC1Q12948 553 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 AUHQ13825 339 aaKnown RBP16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 CST6Q15828 149 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 ST3GAL2Q16842 350 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 OTUD1Q5VV17 481 aaPredicted RBP16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 CXorf57Q6NSI4 855 aaKnown RBP16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 FBXL22Q6P050 247 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 CIR1Q86X95 450 aaPredicted RBP16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 DHX40Q8IX18 779 aaKnown RBP16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 APCDD1Q8J025 514 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 SNX19Q92543 992 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 PLCB1Q9NQ66 1216 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 TMEM51Q9NW97 253 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 COX16Q9P0S2 106 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 NCKAP1Q9Y2A7 1128 aa16.79■□□□□ 0.28
SNRPD3-204ENST00000439775 TTC34A8MYJ7 566 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 F8VZ95 297 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 PES1O00541 588 aaKnown RBP16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 LSM8O95777 96 aaKnown RBP16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 CER1O95813 267 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 PDGFRAP16234 1089 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 VASPP50552 380 aaPredicted RBP16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 SIM1P81133 766 aaPredicted RBP16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 NME3Q13232 169 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 ENOX1Q8TC92 643 aaKnown RBP16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 NT5C3BQ969T7 300 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 BIRC7Q96CA5 298 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 PGAP3Q96FM1 320 aaPredicted RBP16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 RPRD1AQ96P16 312 aaPredicted RBP16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 PPP1R9BQ96SB3 815 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 NPY6RQ99463 290 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 FZD4Q9ULV1 537 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 STAP1Q9ULZ2 295 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 HS3ST4Q9Y661 456 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 FRYQ5TBA9 3013 aa16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 MAP1BP46821 2468 aaKnown RBP16.78■□□□□ 0.28
SNRPD3-204ENST00000439775 SPAARA0A1B0GVQ0 90 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 M0QYT0 321 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 CD27P26842 260 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 MZF1P28698 734 aaPredicted RBP16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 NNMTP40261 264 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 GRIA4P48058 902 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 BNC1Q01954 994 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 CENPCQ03188 943 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 ELAVL3Q14576 367 aaKnown RBP16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 C5orf22Q49AR2 442 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 BRMS1LQ5PSV4 323 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 RBM43Q6ZSC3 357 aaKnown RBP16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 NAXDQ8IW45 347 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 PTPRN2Q92932 1015 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 IGSF8Q969P0 613 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 RPL10LQ96L21 214 aaKnown RBP16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 STK33Q9BYT3 514 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 PDCL3Q9H2J4 239 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 GAREM1Q9H706 876 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 TM9SF3Q9HD45 589 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 PIGVQ9NUD9 493 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 FBXL12Q9NXK8 326 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 ARHGEF38Q9NXL2 777 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 SERGEFQ9UGK8 458 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 ADAMTS1Q9UHI8 967 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 SLCO3A1Q9UIG8 710 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 VANGL2Q9ULK5 521 aa16.77■□□□□ 0.28
SNRPD3-204ENST00000439775 USP24Q9UPU5 2620 aa16.77■□□□□ 0.27
SNRPD3-204ENST00000439775 ASPMQ8IZT6 3477 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms