RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 SIK2Q9H0K1 926 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 HCN2Q9UL51 889 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 VANGL2Q9ULK5 521 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 MMP17Q9ULZ9 603 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 PAXBP1Q9Y5B6 917 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 HS3ST4Q9Y661 456 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 SGK1O00141 431 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 RTN2O75298 545 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 RPP40O75818 363 aaKnown RBP18.26■□□□□ 0.51
CCDC188-201ENST00000439765 F9P00740 461 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 FTLP02792 175 aaPredicted RBP18.26■□□□□ 0.51
CCDC188-201ENST00000439765 GPD1P21695 349 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 WASP42768 502 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 CDH18Q13634 790 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 SPA17Q15506 151 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 CSRP2Q16527 193 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 CCDC14Q49A88 953 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 BRMS1LQ5PSV4 323 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 MPP7Q5T2T1 576 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 BNIPLQ7Z465 357 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 ZNF653Q96CK0 615 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 LOXL4Q96JB6 756 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 ACOX2Q99424 681 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 ISCUQ9H1K1 167 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 SEMA4GQ9NTN9 838 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 ARHGEF38Q9NXL2 777 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 EBF1Q9UH73 591 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 GGA2Q9UJY4 613 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 SNX10Q9Y5X0 201 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 TNRC6BQ9UPQ9 1833 aaKnown RBP18.26■□□□□ 0.51
CCDC188-201ENST00000439765 CKAP5Q14008 2032 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 ANKRD62A6NC57 917 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 SIGLEC16A6NMB1 481 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 FOXD2O60548 495 aaPredicted RBP18.25■□□□□ 0.51
CCDC188-201ENST00000439765 ADAM23O75077 832 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 LUC7L3O95232 432 aaKnown RBP18.25■□□□□ 0.51
CCDC188-201ENST00000439765 IPO7O95373 1038 aaKnown RBP18.25■□□□□ 0.51
CCDC188-201ENST00000439765 CD70P32970 193 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 PTPN9P43378 593 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 IRAK1P51617 712 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 AUHQ13825 339 aaKnown RBP18.25■□□□□ 0.51
CCDC188-201ENST00000439765 RNF43Q68DV7 783 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 FBXL22Q6P050 247 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 DCUN1D2Q6PH85 259 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 CHPFQ8IZ52 775 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 FAM172AQ8WUF8 416 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 SORCS1Q8WY21 1168 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 ERLEC1Q96DZ1 483 aa18.25■□□□□ 0.51
CCDC188-201ENST00000439765 RPRD1AQ96P16 312 aaPredicted RBP18.25■□□□□ 0.51
CCDC188-201ENST00000439765 IRX2Q9BZI1 471 aaPredicted RBP18.25■□□□□ 0.51
CCDC188-201ENST00000439765 CDV3Q9UKY7 258 aaKnown RBP18.25■□□□□ 0.51
CCDC188-201ENST00000439765 AXIN1O15169 862 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 CCP110O43303 1012 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 APBB3O95704 486 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 PABPC1P11940 636 aaKnown RBP18.24■□□□□ 0.51
CCDC188-201ENST00000439765 HNRNPLP14866 589 aaKnown RBP eCLIP18.24■□□□□ 0.51
CCDC188-201ENST00000439765 MAGEA1P43355 309 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 KRT83P78385 493 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 EOGTQ5NDL2 527 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 RABGAP1LQ5R372 815 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 PPP1R15BQ5SWA1 713 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 TMEM215Q68D42 235 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 TMEM92Q6UXU6 159 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 TRMT11Q7Z4G4 463 aaKnown RBP18.24■□□□□ 0.51
CCDC188-201ENST00000439765 ACRBPQ8NEB7 543 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 TSTD1Q8NFU3 115 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 IGSF8Q969P0 613 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 VCPIP1Q96JH7 1222 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 ZC3H10Q96K80 434 aaKnown RBP18.24■□□□□ 0.51
CCDC188-201ENST00000439765 DESI2Q9BSY9 194 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 CACNA2D2Q9NY47 1150 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 MYO1AQ9UBC5 1043 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 CNOT8Q9UFF9 292 aaKnown RBP18.24■□□□□ 0.51
CCDC188-201ENST00000439765 REXO2Q9Y3B8 237 aaKnown RBP18.24■□□□□ 0.51
CCDC188-201ENST00000439765 STARD13Q9Y3M8 1113 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 ADGRG1Q9Y653 693 aa18.24■□□□□ 0.51
CCDC188-201ENST00000439765 H0Y626 953 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 HOXB2P14652 356 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 NUMBP49757 651 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 HDAC4P56524 1084 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 LMAN2Q12907 356 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 MTA1Q13330 715 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 MAMLD1Q13495 774 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 CRY1Q16526 586 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 FUT11Q495W5 492 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 HSF5Q4G112 596 aaPredicted RBP18.23■□□□□ 0.51
CCDC188-201ENST00000439765 FSCBQ5H9T9 825 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 ANO7Q6IWH7 933 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 PRR23CQ6ZRP0 262 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 CHST9Q7L1S5 443 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 C14orf80Q86SX3 495 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 CCDC117Q8IWD4 279 aaPredicted RBP18.23■□□□□ 0.51
CCDC188-201ENST00000439765 AHI1Q8N157 1196 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 RTKNQ9BST9 563 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 PARVAQ9NVD7 372 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 PYCARDQ9ULZ3 195 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 PCDHA13Q9Y5I0 950 aa18.23■□□□□ 0.51
CCDC188-201ENST00000439765 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.23■□□□□ 0.51
CCDC188-201ENST00000439765 MED19A0JLT2 244 aaPredicted RBP18.22■□□□□ 0.51
CCDC188-201ENST00000439765 ENDOD1O94919 500 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms