RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 ACSL1P33121 698 aa19.41■□□□□ 0.7
CCDC78-204ENST00000439619 MATKP42679 507 aa19.41■□□□□ 0.7
CCDC78-204ENST00000439619 AFF3P51826 1226 aaKnown RBP19.41■□□□□ 0.7
CCDC78-204ENST00000439619 ZNF177Q13360 481 aaPredicted RBP19.41■□□□□ 0.7
CCDC78-204ENST00000439619 EIF4EBP2Q13542 120 aaPredicted RBP19.41■□□□□ 0.7
CCDC78-204ENST00000439619 MMS22LQ6ZRQ5 1243 aa19.41■□□□□ 0.7
CCDC78-204ENST00000439619 PIP4P1Q86T03 277 aa19.41■□□□□ 0.7
CCDC78-204ENST00000439619 ERICH1Q86X53 443 aa19.41■□□□□ 0.7
CCDC78-204ENST00000439619 DHX40Q8IX18 779 aaKnown RBP19.41■□□□□ 0.7
CCDC78-204ENST00000439619 CCAR2Q8N163 923 aaKnown RBP19.41■□□□□ 0.7
CCDC78-204ENST00000439619 ANKRD20A12PQ8NF67 263 aa19.41■□□□□ 0.7
CCDC78-204ENST00000439619 ENOX1Q8TC92 643 aaKnown RBP19.41■□□□□ 0.7
CCDC78-204ENST00000439619 MYEOVQ96EZ4 313 aa19.41■□□□□ 0.7
CCDC78-204ENST00000439619 SAMSN1Q9NSI8 373 aaKnown RBP19.41■□□□□ 0.7
CCDC78-204ENST00000439619 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.41■□□□□ 0.7
CCDC78-204ENST00000439619 AJAP1Q9UKB5 411 aaPredicted RBP19.41■□□□□ 0.7
CCDC78-204ENST00000439619 INTS6Q9UL03 887 aaKnown RBP19.41■□□□□ 0.7
CCDC78-204ENST00000439619 SIN3BO75182 1162 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 LSM8O95777 96 aaKnown RBP19.4■□□□□ 0.7
CCDC78-204ENST00000439619 F9P00740 461 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 PNMA6AP0CW24 399 aaPredicted RBP19.4■□□□□ 0.7
CCDC78-204ENST00000439619 UCHL3P15374 230 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 RNASE9P60153 205 aaKnown RBP19.4■□□□□ 0.7
CCDC78-204ENST00000439619 PITX1P78337 314 aaPredicted RBP19.4■□□□□ 0.7
CCDC78-204ENST00000439619 SIM1P81133 766 aaPredicted RBP19.4■□□□□ 0.7
CCDC78-204ENST00000439619 PTPN20Q4JDL3 420 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 FKBP15Q5T1M5 1219 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 ACBD5Q5T8D3 534 aaPredicted RBP19.4■□□□□ 0.7
CCDC78-204ENST00000439619 C18orf8Q96DM3 657 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 MRGPRX3Q96LB0 322 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 PRMT1Q99873 361 aaKnown RBP19.4■□□□□ 0.7
CCDC78-204ENST00000439619 OMDQ99983 421 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 STK33Q9BYT3 514 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 PABPC3Q9H361 631 aaKnown RBP19.4■□□□□ 0.7
CCDC78-204ENST00000439619 C6orf106Q9H6K1 298 aaPredicted RBP19.4■□□□□ 0.7
CCDC78-204ENST00000439619 WDCPQ9H6R7 721 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 PLCB1Q9NQ66 1216 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 LMBRD1Q9NUN5 540 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 FBXL12Q9NXK8 326 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.4■□□□□ 0.7
CCDC78-204ENST00000439619 FHOD1Q9Y613 1164 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 LAMA1P25391 3075 aa19.4■□□□□ 0.7
CCDC78-204ENST00000439619 LRRC72A6NJI9 287 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 FSBPO95073 299 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 TRIM16O95361 564 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 PDGFRAP16234 1089 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 SCNN1AP37088 669 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 KCNMA1Q12791 1236 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 AUHQ13825 339 aaKnown RBP19.39■□□□□ 0.69
CCDC78-204ENST00000439619 CST6Q15828 149 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 ST3GAL2Q16842 350 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 BRMS1LQ5PSV4 323 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 FBXL22Q6P050 247 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 SASS6Q6UVJ0 657 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 DSG4Q86SJ6 1040 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 OR2I1PQ8NGU4 316 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 MYO19Q96H55 970 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 SLC25A13Q9UJS0 675 aa19.39■□□□□ 0.69
CCDC78-204ENST00000439619 TNRC6BQ9UPQ9 1833 aaKnown RBP19.39■□□□□ 0.69
CCDC78-204ENST00000439619 TTC34A8MYJ7 566 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 CLDN11O75508 207 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 RNASEH2AO75792 299 aaKnown RBP19.38■□□□□ 0.69
CCDC78-204ENST00000439619 ADH1BP00325 375 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 CD27P26842 260 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 CDH5P33151 784 aaPredicted RBP19.38■□□□□ 0.69
CCDC78-204ENST00000439619 SULT1E1P49888 294 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 PLK1P53350 603 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 ELAVL3Q14576 367 aaKnown RBP19.38■□□□□ 0.69
CCDC78-204ENST00000439619 C9orf64Q5T6V5 341 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 FAM102AQ5T9C2 384 aaPredicted RBP19.38■□□□□ 0.69
CCDC78-204ENST00000439619 TAF3Q5VWG9 929 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 ITIH6Q6UXX5 1313 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 LRRC31Q6UY01 552 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 ADAT2Q7Z6V5 191 aaKnown RBP19.38■□□□□ 0.69
CCDC78-204ENST00000439619 MMAAQ8IVH4 418 aaKnown RBP19.38■□□□□ 0.69
CCDC78-204ENST00000439619 APCDD1Q8J025 514 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 SKA1Q96BD8 255 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 RPL10LQ96L21 214 aaKnown RBP19.38■□□□□ 0.69
CCDC78-204ENST00000439619 SIK2Q9H0K1 926 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 MTG2Q9H4K7 406 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 GAREM1Q9H706 876 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 OSGEPQ9NPF4 335 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 TAB2Q9NYJ8 693 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 VANGL2Q9ULK5 521 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 FZD4Q9ULV1 537 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 DAAM1Q9Y4D1 1078 aa19.38■□□□□ 0.69
CCDC78-204ENST00000439619 FAM47DPA6NHR8 397 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 F8VZ95 297 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 PAGE1O75459 146 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 CD59P13987 128 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 SLC8A1P32418 973 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 CTSOP43234 321 aaPredicted RBP19.37■□□□□ 0.69
CCDC78-204ENST00000439619 GABRB2P47870 512 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 DEUP1Q05D60 604 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 SUZ12Q15022 739 aaKnown RBP19.37■□□□□ 0.69
CCDC78-204ENST00000439619 CIR1Q86X95 450 aaPredicted RBP19.37■□□□□ 0.69
CCDC78-204ENST00000439619 ZNF677Q86XU0 584 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 BIRC7Q96CA5 298 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 NPY6RQ99463 290 aa19.37■□□□□ 0.69
CCDC78-204ENST00000439619 NAA15Q9BXJ9 866 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms