RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 HAPLN3Q96S86 360 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 NAP1L4Q99733 375 aaKnown RBP11.6□□□□□ -0.55
RTN4-211ENST00000438462 FZD3Q9NPG1 666 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 SUN2Q9UH99 717 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 C2CD2Q9Y426 696 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 PCDHA5Q9Y5H7 936 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 ACANP16112 2415 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 SLC27A2O14975 620 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 OGTO15294 1046 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 RTN3O95197 1032 aaPredicted RBP11.59□□□□□ -0.55
RTN4-211ENST00000438462 ZDHHC11BP0C7U3 371 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 CCL4P13236 92 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 PRLRP16471 622 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 TCN2P20062 427 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 PDCP20941 246 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 HLA-FP30511 346 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 PNPLA4P41247 253 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 PGFP49763 221 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 ZFP36L1Q07352 338 aaKnown RBP11.59□□□□□ -0.55
RTN4-211ENST00000438462 ELOAQ14241 798 aaKnown RBP11.59□□□□□ -0.55
RTN4-211ENST00000438462 PTK2BQ14289 1009 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 MAPRE1Q15691 268 aaKnown RBP11.59□□□□□ -0.55
RTN4-211ENST00000438462 TRIM69Q86WT6 500 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 UNC5BQ8IZJ1 945 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 SCAMP5Q8TAC9 235 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 LMX1AQ8TE12 382 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 RUFY2Q8WXA3 655 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 NDRG1Q92597 394 aaKnown RBP11.59□□□□□ -0.55
RTN4-211ENST00000438462 KIAA1143Q96AT1 154 aaPredicted RBP11.59□□□□□ -0.55
RTN4-211ENST00000438462 RANBP9Q96S59 729 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 CDH9Q9ULB4 789 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 PADI4Q9UM07 663 aa11.59□□□□□ -0.55
RTN4-211ENST00000438462 OAS3Q9Y6K5 1087 aaKnown RBP11.59□□□□□ -0.55
RTN4-211ENST00000438462 A0A0B4J269 797 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 TPP1O14773 563 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 LRRTM2O43300 516 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 HIP1RO75146 1068 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 PPP6R2O75170 966 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 NME1P15531 152 aaKnown RBP11.58□□□□□ -0.56
RTN4-211ENST00000438462 LMO2P25791 158 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 SSTR2P30874 369 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 POLR2BP30876 1174 aaKnown RBP11.58□□□□□ -0.56
RTN4-211ENST00000438462 TXKP42681 527 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 MC1RQ01726 317 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 C16orf72Q14CZ0 275 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 NTRK3Q16288 839 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 CALCRLQ16602 461 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 ARHGAP44Q17R89 818 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 MDH1BQ5I0G3 518 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 OR6B2Q6IFH4 312 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 Q71RC1 249 aaPredicted RBP11.58□□□□□ -0.56
RTN4-211ENST00000438462 ZNF438Q7Z4V0 828 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 ADIPOR2Q86V24 386 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 TGIF2LYQ8IUE0 185 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 WFIKKN2Q8TEU8 576 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 SLC2A11Q9BYW1 496 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 BHMT2Q9H2M3 363 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 LRRN3Q9H3W5 708 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 SLAMF7Q9NQ25 335 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 COPG2Q9UBF2 871 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 CPSF3Q9UKF6 684 aaKnown RBP11.58□□□□□ -0.56
RTN4-211ENST00000438462 SNX9Q9Y5X1 595 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 JMJD1CQ15652 2540 aa11.58□□□□□ -0.56
RTN4-211ENST00000438462 LOC101059948A0A1B0GTJ6 334 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 MDM4O15151 490 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 SLC31A1O15431 190 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 DNAJB5O75953 348 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 CSF2P04141 144 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 CYBBP04839 570 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 DLDP09622 509 aaKnown RBP11.57□□□□□ -0.56
RTN4-211ENST00000438462 KLK2P20151 261 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 VARSP26640 1264 aaKnown RBP11.57□□□□□ -0.56
RTN4-211ENST00000438462 CHKAP35790 457 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 CLDN2P57739 230 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 PDE4CQ08493 712 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 ADAM9Q13443 819 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 PHF19Q5T6S3 580 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.57□□□□□ -0.56
RTN4-211ENST00000438462 HS2ST1Q7LGA3 356 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 PTAR1Q7Z6K3 402 aaPredicted RBP11.57□□□□□ -0.56
RTN4-211ENST00000438462 DDI1Q8WTU0 396 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 ZNF518BQ9C0D4 1074 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.57□□□□□ -0.56
RTN4-211ENST00000438462 KLF15Q9UIH9 416 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 CROTQ9UKG9 612 aa11.57□□□□□ -0.56
RTN4-211ENST00000438462 NSD1Q96L73 2696 aaPredicted RBP11.56□□□□□ -0.56
RTN4-211ENST00000438462 SGSM2O43147 1006 aa11.56□□□□□ -0.56
RTN4-211ENST00000438462 PLRG1O43660 514 aaKnown RBP11.56□□□□□ -0.56
RTN4-211ENST00000438462 RNGTTO60942 597 aaKnown RBP11.56□□□□□ -0.56
RTN4-211ENST00000438462 STC2O76061 302 aa11.56□□□□□ -0.56
RTN4-211ENST00000438462 ADH1BP00325 375 aa11.56□□□□□ -0.56
RTN4-211ENST00000438462 KLKB1P03952 638 aa11.56□□□□□ -0.56
RTN4-211ENST00000438462 MAPTP10636 758 aaKnown RBP11.56□□□□□ -0.56
RTN4-211ENST00000438462 C5AR1P21730 350 aa11.56□□□□□ -0.56
RTN4-211ENST00000438462 DRD3P35462 400 aa11.56□□□□□ -0.56
RTN4-211ENST00000438462 PGDP52209 483 aa11.56□□□□□ -0.56
RTN4-211ENST00000438462 METAP1P53582 386 aa11.56□□□□□ -0.56
RTN4-211ENST00000438462 SLC5A3P53794 718 aa11.56□□□□□ -0.56
RTN4-211ENST00000438462 PMS2P54278 862 aa11.56□□□□□ -0.56
RTN4-211ENST00000438462 FZD2Q14332 565 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms