RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 C4orf47A7E2U8 309 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 SMTNL1A8MU46 457 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 ASLP04424 464 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 CYP1A1P04798 512 aaPredicted RBP18.89■□□□□ 0.61
HMGN1-207ENST00000436324 CFIP05156 583 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 MZF1P28698 734 aaPredicted RBP18.89■□□□□ 0.61
HMGN1-207ENST00000436324 SCNN1AP37088 669 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 CXCR3P49682 368 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 LIMK1P53667 647 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 PLEKHG6Q3KR16 790 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 TRNP1Q6NT89 227 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 EMC1Q8N766 993 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 MYO19Q96H55 970 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 MRGPRX3Q96LB0 322 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 CFAP57Q96MR6 1250 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 C11orf70Q9BRQ4 267 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 FSCN3Q9NQT6 498 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 ANLNQ9NQW6 1124 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 TMPRSS4Q9NRS4 437 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 WSB2Q9NYS7 404 aaPredicted RBP18.89■□□□□ 0.61
HMGN1-207ENST00000436324 FRYLO94915 3013 aa18.89■□□□□ 0.61
HMGN1-207ENST00000436324 A0A1B0GVM2 712 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 TCAF2A6NFQ2 919 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 TTC34A8MYJ7 566 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 GJB6O95452 261 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 MAOBP27338 520 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 ZNF165P49910 485 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 FOXK2Q01167 660 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 SLC25A52Q3SY17 297 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 TTC39BQ5VTQ0 682 aaPredicted RBP18.88■□□□□ 0.61
HMGN1-207ENST00000436324 RNF219Q5W0B1 726 aaPredicted RBP18.88■□□□□ 0.61
HMGN1-207ENST00000436324 NT5C3BQ969T7 300 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 ZNF419Q96HQ0 510 aaPredicted RBP18.88■□□□□ 0.61
HMGN1-207ENST00000436324 RPL10LQ96L21 214 aaKnown RBP18.88■□□□□ 0.61
HMGN1-207ENST00000436324 BPIFA3Q9BQP9 254 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 NUSAP1Q9BXS6 441 aaKnown RBP18.88■□□□□ 0.61
HMGN1-207ENST00000436324 ARHGEF38Q9NXL2 777 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 SLCO3A1Q9UIG8 710 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 TMEM59LQ9UK28 342 aa18.88■□□□□ 0.61
HMGN1-207ENST00000436324 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-207ENST00000436324 MEI4A8MW99 385 aa18.87■□□□□ 0.61
HMGN1-207ENST00000436324 I6L893 689 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-207ENST00000436324 SIN3BO75182 1162 aa18.87■□□□□ 0.61
HMGN1-207ENST00000436324 F9P00740 461 aa18.87■□□□□ 0.61
HMGN1-207ENST00000436324 MMP8P22894 467 aa18.87■□□□□ 0.61
HMGN1-207ENST00000436324 OXTRP30559 389 aa18.87■□□□□ 0.61
HMGN1-207ENST00000436324 STK19P49842 368 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-207ENST00000436324 RPS14P62263 151 aaKnown RBP18.87■□□□□ 0.61
HMGN1-207ENST00000436324 ATP11AP98196 1134 aa18.87■□□□□ 0.61
HMGN1-207ENST00000436324 ECT2LQ008S8 904 aa18.87■□□□□ 0.61
HMGN1-207ENST00000436324 MTA1Q13330 715 aa18.87■□□□□ 0.61
HMGN1-207ENST00000436324 ZNF177Q13360 481 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-207ENST00000436324 BRMS1LQ5PSV4 323 aa18.87■□□□□ 0.61
HMGN1-207ENST00000436324 TRIM72Q6ZMU5 477 aa18.87■□□□□ 0.61
HMGN1-207ENST00000436324 PGAP3Q96FM1 320 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-207ENST00000436324 NUP58Q9BVL2 599 aa18.87■□□□□ 0.61
HMGN1-207ENST00000436324 EVLQ9UI08 416 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-207ENST00000436324 NUP205Q92621 2012 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 PLXND1Q9Y4D7 1925 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 SYCE3A1L190 88 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 CNTN5O94779 1100 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 DNTTP04053 509 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 DPP6P42658 865 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 MAPK8P45983 427 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 NSFP46459 744 aaKnown RBP18.86■□□□□ 0.61
HMGN1-207ENST00000436324 CDO1Q16878 200 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 DUOXA1Q1HG43 343 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 CLEC16AQ2KHT3 1053 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 HNRNPA1L2Q32P51 320 aaKnown RBP18.86■□□□□ 0.61
HMGN1-207ENST00000436324 UAP1L1Q3KQV9 507 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 PPM1JQ5JR12 505 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 SYCP2LQ5T4T6 812 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 CXorf57Q6NSI4 855 aaKnown RBP18.86■□□□□ 0.61
HMGN1-207ENST00000436324 FAM131BQ86XD5 332 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 OR52K2Q8NGK3 314 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 RXFP2Q8WXD0 754 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 FOXJ1Q92949 421 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 TMEM9BQ9NQ34 198 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 RTN4Q9NQC3 1192 aaKnown RBP18.86■□□□□ 0.61
HMGN1-207ENST00000436324 ADAM22Q9P0K1 906 aa18.86■□□□□ 0.61
HMGN1-207ENST00000436324 GON4LQ3T8J9 2241 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 SRPRAP08240 638 aaKnown RBP18.85■□□□□ 0.61
HMGN1-207ENST00000436324 UNGP13051 313 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-207ENST00000436324 ENGP17813 658 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 RDXP35241 583 aaKnown RBP18.85■□□□□ 0.61
HMGN1-207ENST00000436324 SLC12A1Q13621 1099 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 C15orf59Q2T9L4 293 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-207ENST00000436324 FILIP1LQ4L180 1135 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 RAB6CQ53S08 254 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 ALFQ53S48 1182 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 WDR45BQ5MNZ6 344 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 DCAF12L1Q5VU92 463 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 PEAR1Q5VY43 1037 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-207ENST00000436324 ZNF776Q68DI1 518 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-207ENST00000436324 SLC23A3Q6PIS1 610 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 JOSD2Q8TAC2 188 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 CEP76Q8TAP6 659 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 GANCQ8TET4 914 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 AGPAT1Q99943 283 aa18.85■□□□□ 0.61
HMGN1-207ENST00000436324 FUCA2Q9BTY2 467 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms