RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 ATXN1P54253 815 aaKnown RBP16.76■□□□□ 0.27
SMPD4-207ENST00000435455 CDH4P55283 916 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 ZNF177Q13360 481 aaPredicted RBP16.76■□□□□ 0.27
SMPD4-207ENST00000435455 CDO1Q16878 200 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 C15orf59Q2T9L4 293 aaPredicted RBP16.76■□□□□ 0.27
SMPD4-207ENST00000435455 PLEKHG6Q3KR16 790 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 ARL13BQ3SXY8 428 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 PMS2CLQ68D20 193 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 WDR59Q6PJI9 974 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 SLC36A4Q6YBV0 504 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 C14orf80Q86SX3 495 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 CIR1Q86X95 450 aaPredicted RBP16.76■□□□□ 0.27
SMPD4-207ENST00000435455 KDM1BQ8NB78 822 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 CENPIQ92674 756 aaPredicted RBP16.76■□□□□ 0.27
SMPD4-207ENST00000435455 IGSF8Q969P0 613 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 MRGPRX1Q96LB2 322 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 XPO4Q9C0E2 1151 aaKnown RBP16.76■□□□□ 0.27
SMPD4-207ENST00000435455 TMEM245Q9H330 911 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 FBRSQ9HAH7 460 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 SUN2Q9UH99 717 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 CAPN11Q9UMQ6 739 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 LUC7L2Q9Y383 392 aaKnown RBP16.76■□□□□ 0.27
SMPD4-207ENST00000435455 PCDHGA5Q9Y5G8 931 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 CEP250Q9BV73 2442 aa16.76■□□□□ 0.27
SMPD4-207ENST00000435455 ITIH6Q6UXX5 1313 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 TCRBV5S1A1TA0A578 114 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 TMCO5BA8MYB1 307 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 I6L893 689 aaPredicted RBP16.75■□□□□ 0.27
SMPD4-207ENST00000435455 MAP3K13O43283 966 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 SRPRAP08240 638 aaKnown RBP16.75■□□□□ 0.27
SMPD4-207ENST00000435455 GGCXP38435 758 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 ECT2LQ008S8 904 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 SULT2A1Q06520 285 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 CAMK2GQ13555 558 aaPredicted RBP16.75■□□□□ 0.27
SMPD4-207ENST00000435455 PTPRNQ16849 979 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 MAP7D1Q3KQU3 841 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 TDRD12Q587J7 1177 aaKnown RBP16.75■□□□□ 0.27
SMPD4-207ENST00000435455 RNF219Q5W0B1 726 aaPredicted RBP16.75■□□□□ 0.27
SMPD4-207ENST00000435455 DCUN1D2Q6PH85 259 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 KIAA1324Q6UXG2 1013 aaKnown RBP16.75■□□□□ 0.27
SMPD4-207ENST00000435455 METTL3Q86U44 580 aaKnown RBP16.75■□□□□ 0.27
SMPD4-207ENST00000435455 VPS36Q86VN1 386 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 FAM172AQ8WUF8 416 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 RLN3Q8WXF3 142 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 ERLEC1Q96DZ1 483 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 PRDM16Q9HAZ2 1276 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 ANLNQ9NQW6 1124 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 TAS2R14Q9NYV8 317 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMPD4-207ENST00000435455 NUP205Q92621 2012 aa16.75■□□□□ 0.27
SMPD4-207ENST00000435455 CEP192Q8TEP8 1941 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 E9PAM4 449 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 FOXD2O60548 495 aaPredicted RBP16.74■□□□□ 0.27
SMPD4-207ENST00000435455 RTN2O75298 545 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 SKILP12757 684 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 HLA-EP13747 358 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 BCKDHBP21953 392 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 RRM1P23921 792 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 ADRA1BP35368 520 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 ZNF143P52747 638 aaPredicted RBP16.74■□□□□ 0.27
SMPD4-207ENST00000435455 PLK1P53350 603 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 SPDYCQ5MJ68 293 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 PPP1R15BQ5SWA1 713 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 CXorf57Q6NSI4 855 aaKnown RBP16.74■□□□□ 0.27
SMPD4-207ENST00000435455 LPCAT2Q7L5N7 544 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 KIAA2013Q8IYS2 634 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 ZNF683Q8IZ20 524 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 CPLX3Q8WVH0 158 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 TRIM11Q96F44 468 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 SIPA1Q96FS4 1042 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 MCEEQ96PE7 176 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 PARVAQ9NVD7 372 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 USP18Q9UMW8 372 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 ERVW-1Q9UQF0 538 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 TBC1D30Q9Y2I9 924 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 DMXL1Q9Y485 3027 aa16.74■□□□□ 0.27
SMPD4-207ENST00000435455 GON4LQ3T8J9 2241 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 IGLV3-10A0A075B6K4 115 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 DRGXA6NNA5 263 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 DDX3XO00571 662 aaKnown RBP eCLIP16.73■□□□□ 0.27
SMPD4-207ENST00000435455 FTLP02792 175 aaPredicted RBP16.73■□□□□ 0.27
SMPD4-207ENST00000435455 GYPCP04921 128 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 SERPING1P05155 500 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 IRAK1P51617 712 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 NRG1Q02297 640 aaPredicted RBP16.73■□□□□ 0.27
SMPD4-207ENST00000435455 SPEM2Q0P670 501 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 TRIM14Q14142 442 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 ARID5BQ14865 1188 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 CSRP2Q16527 193 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 SH3PXD2AQ5TCZ1 1133 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 HGSNATQ68CP4 663 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 PLEKHA7Q6IQ23 1121 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 TMPRSS6Q8IU80 811 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 APCDD1Q8J025 514 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 RNF214Q8ND24 703 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 OR2T3Q8NH03 318 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 PRCCQ92733 491 aaPredicted RBP16.73■□□□□ 0.27
SMPD4-207ENST00000435455 MRGPRX3Q96LB0 322 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 CNPY3Q9BT09 278 aa16.73■□□□□ 0.27
SMPD4-207ENST00000435455 MKRN2Q9H000 416 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms