RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 MRM3Q9HC36 420 aaKnown RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 CASS4Q9NQ75 786 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 AAASQ9NRG9 546 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 APEX2Q9UBZ4 518 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 BCAP29Q9UHQ4 241 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 RNF112Q9ULX5 631 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 ZNFX1Q9P2E3 1918 aaKnown RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SPATA31A5Q5VU36 1347 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 FRMPD2Q68DX3 1309 aaPredicted RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SPATA31A7Q8IWB4 1347 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 MYH11P35749 1972 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 ZMYM2Q9UBW7 1377 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 PSMD12O00232 456 aaPredicted RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 ADAMTS4O75173 837 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 CDH16O75309 829 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 ACSL3O95573 720 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 C6orf222P0C671 652 aaPredicted RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 CREB1P16220 341 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SHMT1P34896 483 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 MAGEA11P43364 429 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 NPTX2P47972 431 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 GPC5P78333 572 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 NR1H3Q13133 447 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SNTA1Q13424 505 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 AADACL2Q6P093 401 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 POTEGQ6S5H5 508 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 CYP20A1Q6UW02 462 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 BNC2Q6ZN30 1099 aaPredicted RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 RAPH1Q70E73 1250 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 CATSPER4Q7RTX7 472 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 MAPKAPK5Q8IW41 473 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SYTL1Q8IYJ3 562 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 ZDHHC14Q8IZN3 488 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 CLYBLQ8N0X4 340 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 GDPD5Q8WTR4 605 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 NCLNQ969V3 563 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 MARVELD3Q96A59 401 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SLC47A1Q96FL8 570 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 C1orf50Q9BV19 199 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 TIGARQ9NQ88 270 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 WDR70Q9NW82 654 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 GPRC5BQ9NZH0 403 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SUCOQ9UBS9 1254 aaKnown RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 NEU2Q9Y3R4 380 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 AP4S1Q9Y587 144 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 C2CD2LO14523 706 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 MSI1O43347 362 aaKnown RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 OR7A10O76100 309 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 POU2F1P14859 743 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 AMPD1P23109 780 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SERPINB1P30740 379 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 RFC4P35249 363 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 BMPR1AP36894 532 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 NR4A2P43354 598 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 MARCKSL1P49006 195 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 HCAR3P49019 387 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 BMXP51813 675 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 COPZ1P61923 177 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 RPS8P62241 208 aaKnown RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 PTK6Q13882 451 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 TCHHL1Q5QJ38 904 aaPredicted RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 VARS2Q5ST30 1063 aaKnown RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 C1orf146Q5VVC0 180 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 UBE2UQ5VVX9 321 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 GTF2IRD2BQ6EKJ0 949 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 ANGPTL8Q6UXH0 198 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 RNF207Q6ZRF8 634 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 GTF2IRD2Q86UP8 949 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 RTKN2Q8IZC4 609 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 ANKRD35Q8N283 1001 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.5□□□□□ -1.21
GARNL3-205ENST00000435213 TBC1D15Q8TC07 691 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 FAM167AQ96KS9 214 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 GMLQ99445 158 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 DCUN1D5Q9BTE7 237 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 OR51B5Q9H339 312 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 TRIM39Q9HCM9 518 aa7.5□□□□□ -1.21
GARNL3-205ENST00000435213 TMEM238LA0A1B0GVL6 79 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 CAPN8A6NHC0 703 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 TBX3O15119 743 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 SORBS3O60504 671 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 GCNT3O95395 438 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 GH1P01241 217 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 INHBBP09529 407 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 SRGAP2CP0DJJ0 459 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 SRGAP2BP0DMP2 458 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 COMTP21964 271 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 SOX11P35716 441 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 ZNF76P36508 570 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 ALDH3B2P48448 385 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 SLC18A1P54219 525 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 KRT17Q04695 432 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 MOGSQ13724 837 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 MPP2Q14168 576 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 STAT4Q14765 748 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 VPS72Q15906 364 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 LRRC36Q1X8D7 754 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 GRAMD1BQ3KR37 738 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 IYDQ6PHW0 289 aa7.49□□□□□ -1.21
GARNL3-205ENST00000435213 CLNKQ7Z7G1 428 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms