RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 EFCAB1Q9HAE3 211 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 SEPT10Q9P0V9 454 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 TSC22D4Q9Y3Q8 395 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 TRIM17Q9Y577 477 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 A0A1W2PPW3 197 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 H3BNH8 94 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 POLRMTO00411 1230 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 LTFP02788 710 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 HMOX2P30519 316 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 HSD17B4P51659 736 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 IKBKEQ14164 716 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 TMEM132AQ24JP5 1023 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 MAP7D1Q3KQU3 841 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 CORO1BQ9BR76 489 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 FRMD8Q9BZ67 464 aaPredicted RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 MAGEB5Q9BZ81 275 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 UNKQ9C0B0 810 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 ILKAPQ9H0C8 392 aaPredicted RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 CLK4Q9HAZ1 481 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 OLAHQ9NV23 265 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 PCDHB12Q9Y5F1 795 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 PRSS51A0A1B0GVH4 220 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 SAC3D1A6NKF1 404 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 K7EPI3 171 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 TPST1O60507 370 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 LDHAP00338 332 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 ALDH1B1P30837 517 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 GLRBP48167 497 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 HARS2P49590 506 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 EIF2B2P49770 351 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 RGS7P49802 495 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 IRF9Q00978 393 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 BNIP3Q12983 259 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 TAZQ16635 292 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 CA9Q16790 459 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 DCAF6Q58WW2 860 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 SLFN12LQ6IEE8 588 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 ZNF534Q76KX8 674 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 RP9Q8TA86 221 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 VPS50Q96JG6 964 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 RANBP9Q96S59 729 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 ACO2Q99798 780 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 RBMX2Q9Y388 322 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 HES2Q9Y543 173 aa11.81□□□□□ -0.52
HMGCS1-202ENST00000433297 KANSL1LA0AUZ9 987 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 AKAP10O43572 662 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 SERPINB7O75635 380 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 ATE1O95260 518 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 VAPBO95292 243 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 CLIC3O95833 236 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 PRDX6P30041 224 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 PHEXP78562 749 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 GBE1Q04446 702 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 BTG3Q14201 252 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 SEL1L3Q68CR1 1132 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 TMEM53Q6P2H8 277 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 TIFABQ6ZNK6 161 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 CCDC60Q8IWA6 550 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 SNX31Q8N9S9 440 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 RSPH1Q8WYR4 309 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 LRRC39Q96DD0 335 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 PIWIL1Q96J94 861 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 GPATCH1Q9BRR8 931 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 SLC2A11Q9BYW1 496 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 INO80BQ9C086 356 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 SNX15Q9NRS6 342 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 PNPLA3Q9NST1 481 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 SCAF8Q9UPN6 1271 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 ENTPD3O75355 529 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 TIPRLO75663 272 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 PRKCGP05129 697 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 EDN1P05305 212 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 UGT1A6P19224 532 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 UGT1A1P22309 533 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 UGT1A4P22310 534 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 CNTFP26441 200 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 UGT1A3P35503 534 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 UGT1A5P35504 534 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 ALDH16A1Q8IZ83 802 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 CENPSQ8N2Z9 138 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 PCDH19Q8TAB3 1148 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 CERKQ8TCT0 537 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 SREK1Q8WXA9 508 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 PLEKHA8Q96JA3 519 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 BIRC8Q96P09 236 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 AGAP3Q96P47 875 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 SLC38A7Q9NVC3 462 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 MOCS1Q9NZB8 636 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 CCDC78A2IDD5 438 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 BCAS2O75934 225 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 ICAM1P05362 532 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 GPD1P21695 349 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 ALDH3B2P48448 385 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 CD300CQ08708 224 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 EMC2Q15006 297 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 PDCD4Q53EL6 469 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 FGD3Q5JSP0 725 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 FAM160B2Q86V87 743 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 MCF2L2Q86YR7 1114 aa11.8□□□□□ -0.52
HMGCS1-202ENST00000433297 HERC6Q8IVU3 1022 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms