RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 COPAP53621 1224 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 CDH4P55283 916 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 UBASH3AP57075 661 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 ATP11AP98196 1134 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 FANCCQ00597 558 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 ECT2LQ008S8 904 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 RPL6Q02878 288 aaKnown RBP10.12□□□□□ -0.79
HDAC6-207ENST00000430858 SULT2A1Q06520 285 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 C1QBPQ07021 282 aaKnown RBP10.12□□□□□ -0.79
HDAC6-207ENST00000430858 ZNF177Q13360 481 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-207ENST00000430858 ARID5BQ14865 1188 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 ASIC2Q16515 512 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 PLEKHG6Q3KR16 790 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 SFMBT2Q5VUG0 894 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 LRRC31Q6UY01 552 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 MON1BQ7L1V2 547 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 STRADAQ7RTN6 431 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 CYP2U1Q7Z449 544 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 CIR1Q86X95 450 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-207ENST00000430858 TMEFF1Q8IYR6 380 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 EMC1Q8N766 993 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 C3orf20Q8ND61 904 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 NETO1Q8TDF5 533 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 RXFP2Q8WXD0 754 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 IGSF8Q969P0 613 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 RMDN1Q96DB5 314 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 MYO19Q96H55 970 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 HAPLN3Q96S86 360 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 NUP58Q9BVL2 599 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 SELENOOQ9BVL4 669 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 TTYH3Q9C0H2 523 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 SLC6A17Q9H1V8 727 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 ANLNQ9NQW6 1124 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 ITM2CQ9NQX7 267 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 CYP8B1Q9UNU6 501 aa10.12□□□□□ -0.79
HDAC6-207ENST00000430858 SIGLEC16A6NMB1 481 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 DRGXA6NNA5 263 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 I6L893 689 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-207ENST00000430858 NDUFS2O75306 463 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 IGLV3-19P01714 112 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 CD6P30203 668 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 OXTRP30559 389 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 HOXD12P35452 270 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 GGCXP38435 758 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 NNMTP40261 264 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 PRKCIP41743 596 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 PTGER3P43115 390 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 PTPN9P43378 593 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 ATXN1P54253 815 aaKnown RBP10.11□□□□□ -0.79
HDAC6-207ENST00000430858 ZBTB16Q05516 673 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 PUM1Q14671 1186 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC6-207ENST00000430858 CCDC6Q16204 474 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 RSPO4Q2I0M5 234 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-207ENST00000430858 HNRNPA1L2Q32P51 320 aaKnown RBP10.11□□□□□ -0.79
HDAC6-207ENST00000430858 ARL13BQ3SXY8 428 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 CCDC14Q49A88 953 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 AASDHQ4L235 1098 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-207ENST00000430858 RNF219Q5W0B1 726 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-207ENST00000430858 LYSMD4Q5XG99 296 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 ACAD10Q6JQN1 1059 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 CXorf57Q6NSI4 855 aaKnown RBP10.11□□□□□ -0.79
HDAC6-207ENST00000430858 DNAJC24Q6P3W2 148 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 PHLDB2Q86SQ0 1253 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 C14orf80Q86SX3 495 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 FAM131BQ86XD5 332 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 SYT12Q8IV01 421 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 ZNF683Q8IZ20 524 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 APCDD1Q8J025 514 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 JOSD2Q8TAC2 188 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 CENPIQ92674 756 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-207ENST00000430858 IQCDQ96DY2 449 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 VCPIP1Q96JH7 1222 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 MRGPRX3Q96LB0 322 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 SYT11Q9BT88 431 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 PRSS16Q9NQE7 514 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 DLL3Q9NYJ7 618 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 CDV3Q9UKY7 258 aaKnown RBP10.11□□□□□ -0.79
HDAC6-207ENST00000430858 ERVW-1Q9UQF0 538 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 TBC1D30Q9Y2I9 924 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 EML5Q05BV3 1969 aa10.11□□□□□ -0.79
HDAC6-207ENST00000430858 ITIH6Q6UXX5 1313 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 IGLV3-10A0A075B6K4 115 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 A0A1W2PQJ5 194 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 TCRBV5S1A1TA0A578 114 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 TARSL2A2RTX5 802 aaKnown RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 ANKRD62A6NC57 917 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 E9PAM4 449 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 KHNYNO15037 678 aaKnown RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 DESP17661 470 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 GPD1P21695 349 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 MZF1P28698 734 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 RFC1P35251 1148 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 PBX1P40424 430 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 CTSOP43234 321 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 VASPP50552 380 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-207ENST00000430858 TPMTP51580 245 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 IRAK1P51617 712 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 ZNF33AQ06730 810 aa10.1□□□□□ -0.79
HDAC6-207ENST00000430858 KLHL30Q0D2K2 578 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 383.3 ms