RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 FYB2Q5VWT5 728 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 USP49Q70CQ1 688 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 SV2AQ7L0J3 742 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 LSMEM2Q8N112 164 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 ZNF366Q8N895 744 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 CYB5D2Q8WUJ1 264 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 KCNE4Q8WWG9 221 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 TAF4BQ92750 862 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 SERAC1Q96JX3 654 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 SLC6A18Q96N87 628 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 DEPDC7Q96QD5 511 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 SMOQ99835 787 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 NT5C1AQ9BXI3 368 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 ABCG4Q9H172 646 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 TNMDQ9H2S6 317 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 CUEDC2Q9H467 287 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 THSD1Q9NS62 852 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 ABCB8Q9NUT2 735 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 FBXL12Q9NXK8 326 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 CLIC5Q9NZA1 410 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 IL37Q9NZH6 218 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 GGA2Q9UJY4 613 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 A0A1W2PPC4 97 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 FRMD3A2A2Y4 597 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 KLK10O43240 276 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 TSPAN3O60637 253 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 RPN1P04843 607 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 DLDP09622 509 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 PABPC1P11940 636 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 C6P13671 934 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 ZNF16P17020 682 aaPredicted RBP8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 CKMT2P17540 419 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 VAMP1P23763 118 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 EPHA8P29322 1005 aaPredicted RBP8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 CLDN6P56747 220 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 RPS14P62263 151 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 ENPP2Q13822 863 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 STK38Q15208 465 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 SCARA3Q6AZY7 606 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 CLEC20AQ6ZU45 233 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 USP30Q70CQ3 517 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 CCDC186Q7Z3E2 898 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 DHX40Q8IX18 779 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 CPXM2Q8N436 756 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 OR2T34Q8NGX1 318 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 TMA16Q96EY4 203 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 CYFIP2Q96F07 1278 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 WBP1Q96G27 269 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 ZNF578Q96N58 590 aaPredicted RBP8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 FGFBP2Q9BYJ0 223 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 PABPC3Q9H361 631 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 CSNK1G1Q9HCP0 422 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 FBXO10Q9UK96 956 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 AGO1Q9UL18 857 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 FRMD4BQ9Y2L6 1034 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 SRPRBQ9Y5M8 271 aaKnown RBP8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 CELSR3Q9NYQ7 3312 aa8.17□□□□□ -1.1
ECHDC1-207ENST00000430841 COL6A6A6NMZ7 2263 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 B8ZZF3 427 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 CBX4O00257 560 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 BEST1O76090 585 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 ASLP04424 464 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 SLFN14P0C7P3 912 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 CD58P19256 250 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 RBMS1P29558 406 aaKnown RBP8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 NNMTP40261 264 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 PSMD8P48556 350 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 SLC11A2P49281 568 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 YWHAGP61981 247 aaKnown RBP eCLIP8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 GABREP78334 506 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 SRSF11Q05519 484 aaKnown RBP8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 CDH18Q13634 790 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 BMT2Q1RMZ1 405 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 PRAMEF14Q5SWL7 426 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 MBLAC2Q68D91 279 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 FBXL19Q6PCT2 694 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 NCEH1Q6PIU2 408 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 GPRIN1Q7Z2K8 1008 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 DSG4Q86SJ6 1040 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 PRPF39Q86UA1 669 aaKnown RBP8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 BPHLQ86WA6 291 aaPredicted RBP8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 MFN1Q8IWA4 741 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 SIX6OS1Q8N1H7 587 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 C12orf29Q8N999 325 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 OR14C36Q8NHC7 312 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 PIWIL1Q96J94 861 aaKnown RBP8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 TMX3Q96JJ7 454 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 CLIC6Q96NY7 704 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 HNRNPABQ99729 332 aaKnown RBP8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 DDX50Q9BQ39 737 aaKnown RBP8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 KRTAP4-12Q9BQ66 201 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 OCSTAMPQ9BR26 566 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 XYLT2Q9H1B5 865 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 NMUR1Q9HB89 426 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 FBXO2Q9UK22 296 aaPredicted RBP8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 NME7Q9Y5B8 376 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 CLIC4Q9Y696 253 aa8.16□□□□□ -1.1
ECHDC1-207ENST00000430841 NUMA1Q14980 2115 aa8.15□□□□□ -1.1
ECHDC1-207ENST00000430841 TBC1D3DA0A087WVF3 549 aa8.15□□□□□ -1.1
ECHDC1-207ENST00000430841 TBC1D3IA0A087WXS9 549 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms