RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 BOLA3Q53S33 107 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.76■□□□□ 0.27
RIF1-204ENST00000430328 OFCC1Q8IZS5 231 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 GMCL1Q96IK5 515 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 OSBPL3Q9H4L5 887 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 TMBIM4Q9HC24 238 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 AASDHPPTQ9NRN7 309 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 IL13P35225 146 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 NR1H2P55055 460 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 SSTP61278 116 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 DEF8Q6ZN54 512 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 FSTL5Q8N475 847 aaPredicted RBP16.76■□□□□ 0.27
RIF1-204ENST00000430328 MTIF3Q9H2K0 278 aaKnown RBP16.76■□□□□ 0.27
RIF1-204ENST00000430328 TIMMDC1Q9NPL8 285 aa16.76■□□□□ 0.27
RIF1-204ENST00000430328 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.76■□□□□ 0.271e-6■□□□□ 10.7
RIF1-204ENST00000430328 RAB43Q86YS6 212 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 BHLHE22Q8NFJ8 381 aaPredicted RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 REXO5Q96IC2 774 aaKnown RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 SLC24A2Q9UI40 661 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 ST3GAL5Q9UNP4 418 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 IQGAP2Q13576 1575 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 USP17L5A8MUK1 530 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 TRIM38O00635 465 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 EYA4O95677 639 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 ARFIP1P53367 373 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 GPALPP1Q8IXQ4 340 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 OR2L5Q8NG80 312 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 PHF10Q8WUB8 498 aaKnown RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 FATE1Q969F0 183 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 C11orf24Q96F05 449 aaPredicted RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 CYP3A43Q9HB55 503 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 TNK2Q07912 1038 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 ILF2Q12905 390 aaKnown RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 ZBTB6Q15916 424 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 DDX20Q9UHI6 824 aaKnown RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 RBMX2Q9Y388 322 aaKnown RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 F5H5T6 163 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 CDRT15Q96T59 188 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 MED11Q9P086 117 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 SAE1Q9UBE0 346 aaPredicted RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 SNX7Q9UNH6 387 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 PMF1-BGLAPU3KQ54 211 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 ITGA2P17301 1181 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 RPL4P36578 427 aaKnown RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 TUBA1BP68363 451 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 TUBA1AQ71U36 451 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 C10orf107Q8IVU9 208 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 BARHL2Q9NY43 387 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 AFF2P51816 1311 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 ATXN2Q99700 1313 aaKnown RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 DEFA5Q01523 94 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 DCP1BQ8IZD4 617 aaKnown RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 PTCD2Q8WV60 388 aaKnown RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 C12orf66Q96MD2 445 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.75■□□□□ 0.27
RIF1-204ENST00000430328 SNX6Q9UNH7 406 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 RAD17O75943 681 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 RARGP13631 454 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 STXBP1P61764 594 aaKnown RBP16.75■□□□□ 0.27
RIF1-204ENST00000430328 STRIP1Q5VSL9 837 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 POTEHQ6S545 545 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 CHRDL2Q6WN34 429 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 ANKS1AQ92625 1134 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 SPACA7Q96KW9 195 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 PHF12Q96QT6 1004 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 PCDH12Q9NPG4 1184 aa16.75■□□□□ 0.27
RIF1-204ENST00000430328 IRGMA1A4Y4 181 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 ARL5CA6NH57 179 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 S100A3P33764 101 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 MED22Q15528 200 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 PIK3R6Q5UE93 754 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 C11orf63Q6NUN7 778 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 HTRA1Q92743 480 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 PAFAH2Q99487 392 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 TMEM165Q9HC07 324 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 VANGL2Q9ULK5 521 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 SLC33A1O00400 549 aaPredicted RBP16.74■□□□□ 0.27
RIF1-204ENST00000430328 PPM1BO75688 479 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 BAG6P46379 1132 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 GPER1Q99527 375 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 HPF1Q9NWY4 346 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 UPB1Q9UBR1 384 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 AK5Q9Y6K8 562 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 A0A1B0GTH6 734 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 MAGEB16A2A368 324 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 SLC26A11Q86WA9 606 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 ASB2Q96Q27 587 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 EXO5Q9H790 373 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 TMEM8AQ9HCN3 771 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 SAR1AQ9NR31 198 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 AGPAT5Q9NUQ2 364 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 H7C1W4 665 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 CASKO14936 926 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 MRPS22P82650 360 aaKnown RBP16.74■□□□□ 0.27
RIF1-204ENST00000430328 AADACL4Q5VUY2 407 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 AFTPHQ6ULP2 937 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 DNAJC14Q6Y2X3 702 aaPredicted RBP16.74■□□□□ 0.27
RIF1-204ENST00000430328 PYDC1Q8WXC3 89 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 ATXN10Q9UBB4 475 aa16.74■□□□□ 0.27
RIF1-204ENST00000430328 PSME2Q9UL46 239 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms