RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 SPAG6O75602 509 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 ZDHHC11BP0C7U3 371 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 PTPN3P26045 913 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 IRAK1P51617 712 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 CBLBQ13191 982 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 KLHL38Q2WGJ6 581 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 LRRC31Q6UY01 552 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 C16orf59Q7L2K0 433 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 CAND1Q86VP6 1230 aaKnown RBP14.68□□□□□ -0.06
CALD1-207ENST00000430085 PDZD8Q8NEN9 1154 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 DEPDC1BQ8WUY9 529 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 ARHGEF2Q92974 986 aaKnown RBP14.68□□□□□ -0.06
CALD1-207ENST00000430085 LRRC39Q96DD0 335 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 BTN2A3PQ96KV6 586 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 ZNF512Q96ME7 567 aaPredicted RBP14.68□□□□□ -0.06
CALD1-207ENST00000430085 CYP4F11Q9HBI6 524 aa14.68□□□□□ -0.06
CALD1-207ENST00000430085 EIF2B3Q9NR50 452 aaKnown RBP14.68□□□□□ -0.06
CALD1-207ENST00000430085 LAMA2P24043 3122 aaKnown RBP14.68□□□□□ -0.06
CALD1-207ENST00000430085 ABLIM3O94929 683 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 CPP00450 1065 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 HMBSP08397 361 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 PSMB4P28070 264 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 PPM1AP35813 382 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 ALDH1A3P47895 512 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 KPNA1P52294 538 aaPredicted RBP14.67□□□□□ -0.06
CALD1-207ENST00000430085 GEMIN4P57678 1058 aaKnown RBP14.67□□□□□ -0.06
CALD1-207ENST00000430085 PPARDQ03181 441 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 ZNF33AQ06730 810 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 PPIGQ13427 754 aaKnown RBP eCLIP14.67□□□□□ -0.061e-6■■■■□ 24.6
CALD1-207ENST00000430085 TMED2Q15363 201 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 TAF12Q16514 161 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 PIK3R6Q5UE93 754 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 ATPAF2Q8N5M1 289 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 PDCD7Q8N8D1 485 aaKnown RBP14.67□□□□□ -0.06
CALD1-207ENST00000430085 FBF1Q8TES7 1133 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 VAT1Q99536 393 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 NACA2Q9H009 215 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 CCSER2Q9H7U1 834 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 IGSF9Q9P2J2 1179 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 SLC24A2Q9UI40 661 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 RABGEF1Q9UJ41 708 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 TRHDEQ9UKU6 1024 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 VANGL2Q9ULK5 521 aa14.67□□□□□ -0.06
CALD1-207ENST00000430085 SEC24AO95486 1093 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 CSH1P0DML2 217 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 CSH2P0DML3 217 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 DNAJB2P25686 324 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 MMP13P45452 471 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 MS4A13Q5J8X5 152 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 ITPRIPL1Q6GPH6 555 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 C14orf80Q86SX3 495 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 EXOC3L1Q86VI1 746 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 TDRPQ86YL5 185 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 IGDCC3Q8IVU1 814 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 RTL3Q8N8U3 475 aaKnown RBP14.66□□□□□ -0.06
CALD1-207ENST00000430085 OVCA2Q8WZ82 227 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 CFAP36Q96G28 342 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 ACSS3Q9H6R3 686 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 MRPL17Q9NRX2 175 aaKnown RBP14.66□□□□□ -0.06
CALD1-207ENST00000430085 DONSONQ9NYP3 566 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 MPP6Q9NZW5 540 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 ZC3H7BQ9UGR2 993 aaKnown RBP14.66□□□□□ -0.06
CALD1-207ENST00000430085 RSPH14Q9UHP6 348 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 PCDHB12Q9Y5F1 795 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 PRRG1O14668 218 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 MLNP12872 115 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 ELF1P32519 619 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 RING1Q06587 406 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 NR1H3Q13133 447 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 MTA1Q13330 715 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 VEPH1Q14D04 833 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 ACBD5Q5T8D3 534 aaPredicted RBP14.66□□□□□ -0.06
CALD1-207ENST00000430085 ZNF534Q76KX8 674 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 MRRFQ96E11 262 aaKnown RBP14.66□□□□□ -0.06
CALD1-207ENST00000430085 AGAP3Q96P47 875 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 ZYG11BQ9C0D3 744 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 PSMC3IPQ9P2W1 217 aaPredicted RBP14.66□□□□□ -0.06
CALD1-207ENST00000430085 FETUBQ9UGM5 382 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 DNMT3LQ9UJW3 386 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 MAD1L1Q9Y6D9 718 aa14.66□□□□□ -0.06
CALD1-207ENST00000430085 ZBTB24O43167 697 aaPredicted RBP14.65□□□□□ -0.06
CALD1-207ENST00000430085 IGLV3-27P01718 113 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 CCNCP24863 283 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 GCAP28676 217 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 STX2P32856 288 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 LSP1P33241 339 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 ATP5C1P36542 298 aaKnown RBP14.65□□□□□ -0.06
CALD1-207ENST00000430085 MAGEA3P43357 314 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 RAB33AQ14088 237 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 TEX44Q53QW1 395 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 NUGGCQ68CJ6 796 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 ARHGAP12Q8IWW6 846 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 CYP4X1Q8N118 509 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 AGGF1Q8N302 714 aaeCLIP14.65□□□□□ -0.067e-7■■■□□ 15.8
CALD1-207ENST00000430085 XPO6Q96QU8 1125 aaKnown RBP14.65□□□□□ -0.06
CALD1-207ENST00000430085 CYTH2Q99418 400 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 GBA3Q9H227 469 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 EURLQ9NYK6 297 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 FNIP2Q9P278 1114 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 PPARGC1AQ9UBK2 798 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms