RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 EID2Q8N6I1 236 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 ZNF397Q8NF99 534 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-211ENST00000429899 TAF4BQ92750 862 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 TATDN2Q93075 761 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 FAXDC2Q96IV6 333 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 FAM81BQ96LP2 452 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 SPAG5Q96R06 1193 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 ACBD6Q9BR61 282 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 SYT11Q9BT88 431 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 NIF3L1Q9GZT8 377 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.53□□□□□ -0.72
ATG4B-211ENST00000429899 SPHK2Q9NRA0 654 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 STARD5Q9NSY2 213 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 DNAJC17Q9NVM6 304 aaKnown RBP10.53□□□□□ -0.72
ATG4B-211ENST00000429899 DPP3Q9NY33 737 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 ARHGAP20Q9P2F6 1191 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 TBC1D14Q9P2M4 693 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 L1RE1Q9UN81 338 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 PCDHB1Q9Y5F3 818 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 POLQO75417 2590 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 ZFC3H1O60293 1989 aaKnown RBP10.52□□□□□ -0.72
ATG4B-211ENST00000429899 ATP2C2O75185 946 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 IGLV3-19P01714 112 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 PLEKP08567 350 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-211ENST00000429899 MBL2P11226 248 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-211ENST00000429899 TBXAS1P24557 533 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-211ENST00000429899 ATICP31939 592 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 SOX5P35711 763 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 STAT1P42224 750 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 GRIA4P48058 902 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 MAPK8IP2Q13387 824 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-211ENST00000429899 TRPC3Q13507 836 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 SHBQ15464 509 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 ASIC2Q16515 512 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 SGSM1Q2NKQ1 1148 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 SFMBT2Q5VUG0 894 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 IRF2BP2Q7Z5L9 587 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 FAM124AQ86V42 546 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 ZSCAN30Q86W11 494 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 TMPRSS6Q8IU80 811 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 TMTC1Q8IUR5 882 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 SPATA2LQ8IUW3 424 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-211ENST00000429899 FAM71AQ8IYT1 594 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 LRRC52Q8N7C0 313 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 DCBLD1Q8N8Z6 715 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 JAKMIP2Q96AA8 810 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 LIN37Q96GY3 246 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-211ENST00000429899 CHP1Q99653 195 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 DPH1Q9BZG8 443 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 IMPG2Q9BZV3 1241 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 UBE2TQ9NPD8 197 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-211ENST00000429899 CNTN6Q9UQ52 1028 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 SSUH2Q9Y2M2 353 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-211ENST00000429899 STON1Q9Y6Q2 735 aa10.52□□□□□ -0.73
ATG4B-211ENST00000429899 A0A1B0GTQ1 180 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 SSU72P8A0A1W2PR75 194 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 TULP1O00294 542 aaPredicted RBP10.51□□□□□ -0.73
ATG4B-211ENST00000429899 SERPING1P05155 500 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 ITGAVP06756 1048 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 KRT19P08727 400 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 FERP16591 822 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 ABCB4P21439 1286 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 OXTRP30559 389 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 ACSL1P33121 698 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 MAGEA11P43364 429 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 ZNF132P52740 706 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 COPAP53621 1224 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 MFAP3P55082 362 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 GABREP78334 506 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 RBP5P82980 135 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 INSM1Q01101 510 aaPredicted RBP10.51□□□□□ -0.73
ATG4B-211ENST00000429899 ARHGAP44Q17R89 818 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 ASTE1Q2TB18 679 aaPredicted RBP10.51□□□□□ -0.73
ATG4B-211ENST00000429899 SV2CQ496J9 727 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 CCDC81Q6ZN84 652 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 DENND5BQ6ZUT9 1274 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 ADAT2Q7Z6V5 191 aaKnown RBP10.51□□□□□ -0.73
ATG4B-211ENST00000429899 KIAA1524Q8TCG1 905 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 OTUB2Q96DC9 234 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 VCPIP1Q96JH7 1222 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 SPATA17Q96L03 361 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 ORAI3Q9BRQ5 295 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 ARHGAP9Q9BRR9 750 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 TTLL2Q9BWV7 592 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 SDCBP2Q9H190 292 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 LRRC4CQ9HCJ2 640 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 NENFQ9UMX5 172 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 AGAP1Q9UPQ3 857 aa10.51□□□□□ -0.73
ATG4B-211ENST00000429899 NEDD8-MDP1E9PL57 170 aa10.5□□□□□ -0.73
ATG4B-211ENST00000429899 FOXN3O00409 490 aaPredicted RBP10.5□□□□□ -0.73
ATG4B-211ENST00000429899 GFRA2O00451 464 aa10.5□□□□□ -0.73
ATG4B-211ENST00000429899 NRDCO43847 1150 aa10.5□□□□□ -0.73
ATG4B-211ENST00000429899 CACNG3O60359 315 aa10.5□□□□□ -0.73
ATG4B-211ENST00000429899 GFPT2O94808 682 aa10.5□□□□□ -0.73
ATG4B-211ENST00000429899 CISD3P0C7P0 127 aa10.5□□□□□ -0.73
ATG4B-211ENST00000429899 ITGB6P18564 788 aa10.5□□□□□ -0.73
ATG4B-211ENST00000429899 POU3F2P20265 443 aaPredicted RBP10.5□□□□□ -0.73
ATG4B-211ENST00000429899 BDNFP23560 247 aa10.5□□□□□ -0.73
ATG4B-211ENST00000429899 ANXA13P27216 316 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms