RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 CDH17Q12864 832 aa12.91□□□□□ -0.34
CPNE4-201ENST00000429747 ZNF235Q14590 738 aa12.91□□□□□ -0.34
CPNE4-201ENST00000429747 ANO4Q32M45 955 aa12.91□□□□□ -0.34
CPNE4-201ENST00000429747 PMF1Q6P1K2 205 aa12.91□□□□□ -0.34
CPNE4-201ENST00000429747 FRA10AC1Q70Z53 315 aa12.91□□□□□ -0.34
CPNE4-201ENST00000429747 PCDH19Q8TAB3 1148 aa12.91□□□□□ -0.34
CPNE4-201ENST00000429747 GIPC2Q8TF65 315 aa12.91□□□□□ -0.34
CPNE4-201ENST00000429747 STRA6Q9BX79 667 aa12.91□□□□□ -0.34
CPNE4-201ENST00000429747 COG4Q9H9E3 785 aa12.91□□□□□ -0.34
CPNE4-201ENST00000429747 GRIN3BO60391 1043 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 ZNF189O75820 626 aaPredicted RBP12.9□□□□□ -0.34
CPNE4-201ENST00000429747 PTPN7P35236 360 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 GRIA1P42261 906 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 FUT11Q495W5 492 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 UNC5BQ8IZJ1 945 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 CALML6Q8TD86 181 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 GPAMQ9HCL2 828 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 LRRC42Q9Y546 428 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 NR5A2O00482 541 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 RBBP7Q16576 425 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 CA9Q16790 459 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 CELF3Q5SZQ8 465 aaKnown RBP12.9□□□□□ -0.34
CPNE4-201ENST00000429747 ZNF470Q6ECI4 717 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 AAGABQ6PD74 315 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 CLEC4FQ8N1N0 589 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 ZBTB18Q99592 522 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 FETUBQ9UGM5 382 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 MAFBQ9Y5Q3 323 aaPredicted RBP12.9□□□□□ -0.34
CPNE4-201ENST00000429747 SNX5Q9Y5X3 404 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 ADGRA2Q96PE1 1338 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 USP54Q70EL1 1684 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 HEATR9A2RTY3 570 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 METTL18O95568 372 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 TOP3BO95985 862 aaKnown RBP12.9□□□□□ -0.34
CPNE4-201ENST00000429747 ARF4P18085 180 aaPredicted RBP12.9□□□□□ -0.34
CPNE4-201ENST00000429747 PEX2P28328 305 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 GRIA4P48058 902 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 ATXN1P54253 815 aaKnown RBP12.9□□□□□ -0.34
CPNE4-201ENST00000429747 ASRGL1Q7L266 308 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 PIGZQ86VD9 579 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 TMEM192Q8IY95 271 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 CSPG4P5Q96PW8 444 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 TWNKQ96RR1 684 aa12.9□□□□□ -0.34
CPNE4-201ENST00000429747 MRPL45Q9BRJ2 306 aaKnown RBP12.9□□□□□ -0.34
CPNE4-201ENST00000429747 AAR2Q9Y312 384 aaKnown RBP12.9□□□□□ -0.34
CPNE4-201ENST00000429747 SYCE1LA8MT33 242 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 E5RI56 91 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 HDAC3O15379 428 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 YBX3P16989 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 NEK3P51956 506 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 KLF10Q13118 480 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 LPCAT2Q7L5N7 544 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 TAS1R3Q7RTX0 852 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 RELL1Q8IUW5 271 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 PSTKQ8IV42 348 aaKnown RBP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 CMASQ8NFW8 434 aaPredicted RBP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 DENND1AQ8TEH3 1009 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 NDRG1Q92597 394 aaKnown RBP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 DCUN1D5Q9BTE7 237 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 LZTS1Q9Y250 596 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 C2CD4BA6NLJ0 364 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 SUPT3HB4E1H0 165 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 PLIN3O60664 434 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 RECQL4O94761 1208 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 OAS1P00973 400 aaKnown RBP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 UQCRBP14927 111 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 NELFEP18615 380 aaKnown RBP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 ASPAP45381 313 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 WNT7BP56706 349 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 OCA2Q04671 838 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 CDC16Q13042 620 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 LIN52Q52LA3 116 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 CWF19L1Q69YN2 538 aaKnown RBP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 ZFP1Q6P2D0 407 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 LCLAT1Q6UWP7 414 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 MPP5Q8N3R9 675 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 KCTD4Q8WVF5 259 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 RBM22Q9NW64 420 aaKnown RBP eCLIP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 COPG2Q9UBF2 871 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 CDH22Q9UJ99 828 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 ZNF180Q9UJW8 692 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 KLRG2A4D1S0 409 aaPredicted RBP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 RGSL1A5PLK6 1076 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 SLC15A5A6NIM6 579 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 GOLGA8CPA6NN73 597 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 TOMM70O94826 608 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 C2P06681 752 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 VCLP18206 1134 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 PCSK1P29120 753 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 PPIDQ08752 370 aaKnown RBP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 FASTKQ14296 549 aaKnown RBP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 ABI1Q8IZP0 508 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 NIPA2Q8N8Q9 360 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 PRR11Q96HE9 360 aaPredicted RBP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 ULBP1Q9BZM6 244 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 UBE2OQ9C0C9 1292 aaKnown RBP12.89□□□□□ -0.35
CPNE4-201ENST00000429747 EBF3Q9H4W6 596 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 TMEM216Q9P0N5 145 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 TELO2Q9Y4R8 837 aa12.89□□□□□ -0.35
CPNE4-201ENST00000429747 PPME1Q9Y570 386 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms