RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	NUP58	Q9BVL2	599 aa		18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	GPR174	Q9BXC1	333 aa		18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	PRSS16	Q9NQE7	514 aa		18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	SAMSN1	Q9NSI8	373 aa	Known RBP	18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	PCOLCE2	Q9UKZ9	415 aa		18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	KNTC1	P50748	2209 aa		18.35	■□□□□ 0.53
MRPL28-203	ENST00000429738	PTPRB	P23467	1997 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	MEI4	A8MW99	385 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	KCNU1	A8MYU2	1149 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	HSF2BP	O75031	334 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	LUC7L3	O95232	432 aa	Known RBP	18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	ERBB2	P04626	1255 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	ACADM	P11310	421 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	COL28A1	Q2UY09	1125 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	PTPN20	Q4JDL3	420 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	HSP90AA4P	Q58FG1	418 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	EFHC1	Q5JVL4	640 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	OLFML1	Q6UWY5	402 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	FAM183BP	Q6ZVS7	135 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	DEFB106A	Q8N104	65 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	CFAP52	Q8N1V2	620 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	CARNMT1	Q8N4J0	409 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	KDM1B	Q8NB78	822 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	SETD7	Q8WTS6	366 aa	Known RBP	18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	MRGPRX3	Q96LB0	322 aa		18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	PRMT1	Q99873	361 aa	Known RBP	18.34	■□□□□ 0.53
MRPL28-203	ENST00000429738	NYNRIN	Q9P2P1	1898 aa	Known RBP	18.33	■□□□□ 0.53
MRPL28-203	ENST00000429738	SMG1	Q96Q15	3661 aa	Known RBP	18.33	■□□□□ 0.53
MRPL28-203	ENST00000429738	METTL12	A8MUP2	240 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	ASL	P04424	464 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	ZNF883	P0CG24	379 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	TACR2	P21452	398 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	CDH5	P33151	784 aa	Predicted RBP	18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	CSK	P41240	450 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	CDK17	Q00537	523 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	ZBTB16	Q05516	673 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	CDH18	Q13634	790 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	KCNJ12	Q14500	433 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	ARID5B	Q14865	1188 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	KLHDC7A	Q5VTJ3	777 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	RAP1GAP2	Q684P5	730 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	MMS22L	Q6ZRQ5	1243 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	C11orf57	Q6ZUT1	292 aa	Predicted RBP	18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	SLC26A9	Q7LBE3	791 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	CHSY1	Q86X52	802 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	CACUL1	Q86Y37	369 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	LGI2	Q8N0V4	545 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	ATP6V0D2	Q8N8Y2	350 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	ZNF397	Q8NF99	534 aa	Predicted RBP	18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	NOX5	Q96PH1	765 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	NAA15	Q9BXJ9	866 aa	Known RBP	18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	MIR1-1HG	Q9H1L0	117 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	PCED1A	Q9H1Q7	454 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	SUN2	Q9UH99	717 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	FHOD1	Q9Y613	1164 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	CELSR3	Q9NYQ7	3312 aa		18.33	■□□□□ 0.52
MRPL28-203	ENST00000429738	BCAT2	O15382	392 aa	Predicted RBP	18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	SLC2A3	P11169	496 aa		18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	KRT9	P35527	623 aa		18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	BPIFB4	P59827	614 aa		18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	RPS14	P62263	151 aa	Known RBP	18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	SLC6A3	Q01959	620 aa		18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	DRAP1	Q14919	205 aa	Predicted RBP	18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	HNRNPA1L2	Q32P51	320 aa	Known RBP	18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	TCP11X2	Q5H9J9	407 aa		18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	PITRM1	Q5JRX3	1037 aa		18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	DCAF12L1	Q5VU92	463 aa		18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	IL27RA	Q6UWB1	636 aa		18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	RBM43	Q6ZSC3	357 aa	Known RBP	18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	ZCCHC9	Q8N567	271 aa	Known RBP	18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	C1orf216	Q8TAB5	229 aa		18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	MDM1	Q8TC05	714 aa		18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	GAREM1	Q9H706	876 aa		18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	IL21R	Q9HBE5	538 aa		18.32	■□□□□ 0.52
MRPL28-203	ENST00000429738	ITIH6	Q6UXX5	1313 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	DAB1	O75553	588 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	GRAP2	O75791	330 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	CER1	O95813	267 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	SRPRA	P08240	638 aa	Known RBP	18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	CYP11B1	P15538	503 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	EEF1G	P26641	437 aa	Known RBP	18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	CCR1	P32246	355 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	ACSL1	P33121	698 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	ANP32A	P39687	249 aa	Known RBP	18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	SNX16	P57768	344 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	OR6B2	Q6IFH4	312 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	DBX2	Q6ZNG2	339 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	TMPRSS7	Q7RTY8	843 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	ZDHHC17	Q8IUH5	632 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	ENOX1	Q8TC92	643 aa	Known RBP	18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	HNRNPLL	Q8WVV9	542 aa	Known RBP	18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	RSPH9	Q9H1X1	276 aa	Predicted RBP	18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	MTG2	Q9H4K7	406 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	FAM204A	Q9H8W3	233 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	PLCB1	Q9NQ66	1216 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	TM7SF3	Q9NS93	570 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	DDIT4	Q9NX09	232 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	SLC12A6	Q9UHW9	1150 aa		18.31	■□□□□ 0.52
MRPL28-203	ENST00000429738	ERVW-1	Q9UQF0	538 aa		18.31	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms