RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 C16orf62Q7Z3J2 963 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 KCNK18Q7Z418 384 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 DCLK2Q8N568 766 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 URGCPQ8TCY9 931 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 EPS8L3Q8TE67 593 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 HDAC11Q96DB2 347 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 MRPL48Q96GC5 212 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 CDC42EP4Q9H3Q1 356 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 NXF1Q9UBU9 619 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 SLC9A2Q9UBY0 812 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 TMA7Q9Y2S6 64 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 CHD5Q8TDI0 1954 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 ROBO3Q96MS0 1386 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 USP17L10C9JJH3 530 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 MYBP10242 640 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 FGFR2P21802 821 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 SPRP35270 261 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 CAPZA2P47755 286 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 JAK3P52333 1124 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 SESN2P58004 480 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 RTP1P59025 263 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 GRAPQ13588 217 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 PIGHQ14442 188 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 SDE2Q6IQ49 451 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 FOXP4Q8IVH2 680 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 GRAPLQ8TC17 118 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 UGT2B28Q9BY64 529 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 ADAM28Q9UKQ2 775 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 SSTR3P32745 418 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 IFRD2Q12894 506 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 EFR3AQ14156 821 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 FRG1Q14331 258 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 EGFLAMQ63HQ2 1017 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 SEL1L3Q68CR1 1132 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 KLHL6Q8WZ60 621 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 NECTIN3Q9NQS3 549 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 KNTC1P50748 2209 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 TEX46H3BTG2 121 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 GPIP06744 558 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 POLD2P49005 469 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 SSTP61278 116 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 GSTM4Q03013 218 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 RFTN1Q14699 578 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 EZH2Q15910 746 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 SLC9A4Q6AI14 798 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 CIAPIN1Q6FI81 312 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 CENPPQ6IPU0 288 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 GATAD2AQ86YP4 633 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 FAM84BQ96KN1 310 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 PPP3R2Q96LZ3 170 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 PPA2Q9H2U2 334 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 LRRC19Q9H756 370 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 DNAJC11Q9NVH1 559 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 MLXQ9UH92 298 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 ZNF451Q9Y4E5 1061 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 PEX11AO75192 247 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 TROAPQ12815 778 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 TRIM32Q13049 653 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 TNFAIP1Q13829 316 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 ARHGAP17Q68EM7 881 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 NEK5Q6P3R8 708 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 KLHDC10Q6PID8 442 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 ASRGL1Q7L266 308 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 ARID3BQ8IVW6 561 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 APPL2Q8NEU8 664 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 VMP1Q96GC9 406 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 MMP27Q9H306 513 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 NDUFAF1Q9Y375 327 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 FIS1Q9Y3D6 152 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 TJP1Q07157 1748 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 SYNJ2BP-COX16A0A087WUM0 186 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 CYP26A1O43174 497 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 TRIM13O60858 407 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 ITGAVP06756 1048 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 HNF4AP41235 474 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 CASP2P42575 452 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 AUHQ13825 339 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 SBK1Q52WX2 424 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 INTS11Q5TA45 600 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 DENND5AQ6IQ26 1287 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 SCARA5Q6ZMJ2 495 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 ELMOD2Q8IZ81 293 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 KLHL32Q96NJ5 620 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 TRMOQ9BU70 441 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 MSTO1Q9BUK6 570 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 CXorf21Q9HAI6 301 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 COX16Q9P0S2 106 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 PRRC2BQ5JSZ5 2229 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 SIPA1L3O60292 1781 aaPredicted RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 TULP3O75386 442 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 NAT1P18440 290 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 GTF2H1P32780 548 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 ADAM17P78536 824 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 ROR1Q01973 937 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 HNRNPDQ14103 355 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 CLCA4Q14CN2 919 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 INSCQ1MX18 579 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 FAM45AQ8TCE6 357 aa7.67□□□□□ -1.18
SYNPO2-202ENST00000429713 BFARQ9NZS9 450 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms