RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 SPINK2P20155 84 aa28.12■■■□□ 2.09
LMO1-202ENST00000428101 ABCB4P21439 1286 aa28.12■■■□□ 2.09
LMO1-202ENST00000428101 ECT2LQ008S8 904 aa28.12■■■□□ 2.09
LMO1-202ENST00000428101 KCNJ12Q14500 433 aa28.12■■■□□ 2.09
LMO1-202ENST00000428101 TTC31Q49AM3 519 aaPredicted RBP28.12■■■□□ 2.09
LMO1-202ENST00000428101 KLHDC7AQ5VTJ3 777 aa28.12■■■□□ 2.09
LMO1-202ENST00000428101 SLC26A9Q7LBE3 791 aa28.12■■■□□ 2.09
LMO1-202ENST00000428101 CCAR2Q8N163 923 aaKnown RBP28.12■■■□□ 2.09
LMO1-202ENST00000428101 ZNF397Q8NF99 534 aaPredicted RBP28.12■■■□□ 2.09
LMO1-202ENST00000428101 PABPC3Q9H361 631 aaKnown RBP28.12■■■□□ 2.09
LMO1-202ENST00000428101 LMBRD1Q9NUN5 540 aa28.12■■■□□ 2.09
LMO1-202ENST00000428101 USP24Q9UPU5 2620 aa28.11■■■□□ 2.09
LMO1-202ENST00000428101 DAB1O75553 588 aa28.11■■■□□ 2.09
LMO1-202ENST00000428101 BPIFB4P59827 614 aa28.11■■■□□ 2.09
LMO1-202ENST00000428101 RAPGEF1Q13905 1077 aa28.11■■■□□ 2.09
LMO1-202ENST00000428101 FBXL22Q6P050 247 aa28.11■■■□□ 2.09
LMO1-202ENST00000428101 SNX19Q92543 992 aa28.11■■■□□ 2.09
LMO1-202ENST00000428101 RNF34Q969K3 372 aa28.11■■■□□ 2.09
LMO1-202ENST00000428101 RPL10LQ96L21 214 aaKnown RBP28.11■■■□□ 2.09
LMO1-202ENST00000428101 CAMK1GQ96NX5 476 aa28.11■■■□□ 2.09
LMO1-202ENST00000428101 NAA15Q9BXJ9 866 aaKnown RBP28.11■■■□□ 2.09
LMO1-202ENST00000428101 ADAM33Q9BZ11 813 aa28.11■■■□□ 2.09
LMO1-202ENST00000428101 SGK2Q9HBY8 427 aa28.11■■■□□ 2.09
LMO1-202ENST00000428101 CEP83Q9Y592 693 aa28.11■■■□□ 2.09
LMO1-202ENST00000428101 ITIH6Q6UXX5 1313 aa28.11■■■□□ 2.09
LMO1-202ENST00000428101 NYNRINQ9P2P1 1898 aaKnown RBP28.1■■■□□ 2.09
LMO1-202ENST00000428101 SH3BP5O60239 455 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 KRT37O76014 449 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 CYP11B1P15538 503 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 MZF1P28698 734 aaPredicted RBP28.1■■■□□ 2.09
LMO1-202ENST00000428101 CDH5P33151 784 aaPredicted RBP28.1■■■□□ 2.09
LMO1-202ENST00000428101 NOS2P35228 1153 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 SNX16P57768 344 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 SIM1P81133 766 aaPredicted RBP28.1■■■□□ 2.09
LMO1-202ENST00000428101 NME3Q13232 169 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 TCP11X2Q5H9J9 407 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 CT47A1Q5JQC4 288 aaPredicted RBP28.1■■■□□ 2.09
LMO1-202ENST00000428101 OTUD1Q5VV17 481 aaPredicted RBP28.1■■■□□ 2.09
LMO1-202ENST00000428101 CXorf57Q6NSI4 855 aaKnown RBP28.1■■■□□ 2.09
LMO1-202ENST00000428101 USP30Q70CQ3 517 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 IGSF8Q969P0 613 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 BIRC7Q96CA5 298 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 SYNCQ9H7C4 482 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 IL21RQ9HBE5 538 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 SERGEFQ9UGK8 458 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 SCML1Q9UN30 329 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 CABIN1Q9Y6J0 2220 aa28.1■■■□□ 2.09
LMO1-202ENST00000428101 ASPMQ8IZT6 3477 aa28.09■■■□□ 2.09
LMO1-202ENST00000428101 A0A1B0GVM2 712 aa28.09■■■□□ 2.09
LMO1-202ENST00000428101 TARSL2A2RTX5 802 aaKnown RBP28.09■■■□□ 2.09
LMO1-202ENST00000428101 TCAF2A6NFQ2 919 aa28.09■■■□□ 2.09
LMO1-202ENST00000428101 PDGFRAP16234 1089 aa28.09■■■□□ 2.09
LMO1-202ENST00000428101 NUMBP49757 651 aa28.09■■■□□ 2.09
LMO1-202ENST00000428101 SLC12A1Q13621 1099 aa28.09■■■□□ 2.09
LMO1-202ENST00000428101 AUHQ13825 339 aaKnown RBP28.09■■■□□ 2.09
LMO1-202ENST00000428101 RABGAP1LQ5R372 815 aa28.09■■■□□ 2.09
LMO1-202ENST00000428101 TTC39BQ5VTQ0 682 aaPredicted RBP28.09■■■□□ 2.09
LMO1-202ENST00000428101 FAM129BQ96TA1 746 aa28.09■■■□□ 2.09
LMO1-202ENST00000428101 FBXL12Q9NXK8 326 aa28.09■■■□□ 2.09
LMO1-202ENST00000428101 HS3ST4Q9Y661 456 aa28.09■■■□□ 2.09
LMO1-202ENST00000428101 EDDM13A0A1B0GTR0 161 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 M0QYT0 321 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 PES1O00541 588 aaKnown RBP28.08■■■□□ 2.09
LMO1-202ENST00000428101 MID1O15344 667 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 RNASEH1O60930 286 aaKnown RBP28.08■■■□□ 2.09
LMO1-202ENST00000428101 UCHL3P15374 230 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 MATKP42679 507 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 CSNK1EP49674 416 aaKnown RBP28.08■■■□□ 2.09
LMO1-202ENST00000428101 STK19P49842 368 aaPredicted RBP28.08■■■□□ 2.09
LMO1-202ENST00000428101 IRAK1P51617 712 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 PLK1P53350 603 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 CENPCQ03188 943 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 CST6Q15828 149 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 ZDHHC17Q8IUH5 632 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 MMAAQ8IVH4 418 aaKnown RBP28.08■■■□□ 2.09
LMO1-202ENST00000428101 TMEM35BQ8NCS4 154 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 PTPRN2Q92932 1015 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 NPY6RQ99463 290 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 ORAI3Q9BRQ5 295 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 SCNM1Q9BWG6 230 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 GAREM1Q9H706 876 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 NCKAP1Q9Y2A7 1128 aa28.08■■■□□ 2.09
LMO1-202ENST00000428101 A0A1B0GVT2 93 aa28.07■■■□□ 2.08
LMO1-202ENST00000428101 FSBPO95073 299 aa28.07■■■□□ 2.08
LMO1-202ENST00000428101 TFE3P19532 575 aaPredicted RBP28.07■■■□□ 2.08
LMO1-202ENST00000428101 EEF1GP26641 437 aaKnown RBP28.07■■■□□ 2.08
LMO1-202ENST00000428101 GABRB2P47870 512 aa28.07■■■□□ 2.08
LMO1-202ENST00000428101 AFF3P51826 1226 aaKnown RBP28.07■■■□□ 2.08
LMO1-202ENST00000428101 HNRNPDQ14103 355 aaKnown RBP28.07■■■□□ 2.08
LMO1-202ENST00000428101 HLA-BQ31612 363 aa28.07■■■□□ 2.08
LMO1-202ENST00000428101 RNF219Q5W0B1 726 aaPredicted RBP28.07■■■□□ 2.08
LMO1-202ENST00000428101 C14orf80Q86SX3 495 aa28.07■■■□□ 2.08
LMO1-202ENST00000428101 OR52K2Q8NGK3 314 aa28.07■■■□□ 2.08
LMO1-202ENST00000428101 ALG14Q96F25 216 aa28.07■■■□□ 2.08
LMO1-202ENST00000428101 RPRD1AQ96P16 312 aaPredicted RBP28.07■■■□□ 2.08
LMO1-202ENST00000428101 TM9SF3Q9HD45 589 aa28.07■■■□□ 2.08
LMO1-202ENST00000428101 OSGEPQ9NPF4 335 aa28.07■■■□□ 2.08
LMO1-202ENST00000428101 ANLNQ9NQW6 1124 aa28.07■■■□□ 2.08
LMO1-202ENST00000428101 PIGVQ9NUD9 493 aa28.07■■■□□ 2.08
LMO1-202ENST00000428101 VANGL2Q9ULK5 521 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms