RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 RETP07949 1114 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 GZMAP12544 262 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 HLA-EP13747 358 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 GPD1P21695 349 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 MZF1P28698 734 aaPredicted RBP17.21■□□□□ 0.35
VRK2-204ENST00000428021 HDAC4P56524 1084 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 RPL7AP62424 266 aaKnown RBP17.21■□□□□ 0.35
VRK2-204ENST00000428021 CDO1Q16878 200 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 PITRM1Q5JRX3 1037 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 DNAJC24Q6P3W2 148 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 SERPINA13PQ6UXR4 307 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 STRADAQ7RTN6 431 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 CCDC117Q8IWD4 279 aaPredicted RBP17.21■□□□□ 0.35
VRK2-204ENST00000428021 PGBD3Q8N328 593 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 OR52K2Q8NGK3 314 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 IQCDQ96DY2 449 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 ALG14Q96F25 216 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 MRGPRX3Q96LB0 322 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 MRGPRX1Q96LB2 322 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 MKRN2Q9H000 416 aaKnown RBP17.21■□□□□ 0.35
VRK2-204ENST00000428021 MBD1Q9UIS9 605 aaPredicted RBP17.21■□□□□ 0.35
VRK2-204ENST00000428021 GMEB2Q9UKD1 530 aa17.21■□□□□ 0.35
VRK2-204ENST00000428021 DOCK4Q8N1I0 1966 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 IGLV3-10A0A075B6K4 115 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 FTLP02792 175 aaPredicted RBP17.2■□□□□ 0.34
VRK2-204ENST00000428021 ADRA1BP35368 520 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 CTSOP43234 321 aaPredicted RBP17.2■□□□□ 0.34
VRK2-204ENST00000428021 PLK1P53350 603 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 COPAP53621 1224 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 CAMK2GQ13555 558 aaPredicted RBP17.2■□□□□ 0.34
VRK2-204ENST00000428021 STARD3Q14849 445 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 PLEKHG6Q3KR16 790 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 FNDC3BQ53EP0 1204 aaKnown RBP17.2■□□□□ 0.34
VRK2-204ENST00000428021 ALFQ53S48 1182 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 PLEKHA7Q6IQ23 1121 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 PPP1R2P3Q6NXS1 205 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.2■□□□□ 0.34
VRK2-204ENST00000428021 ZNF366Q8N895 744 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 FAM172AQ8WUF8 416 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 LOXL4Q96JB6 756 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 MCEEQ96PE7 176 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 HINFPQ9BQA5 517 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 PARD6AQ9NPB6 346 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 LUC7L2Q9Y383 392 aaKnown RBP17.2■□□□□ 0.34
VRK2-204ENST00000428021 THADAQ6YHU6 1953 aa17.2■□□□□ 0.34
VRK2-204ENST00000428021 E9PAM4 449 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 SYNCRIPO60506 623 aaKnown RBP17.19■□□□□ 0.34
VRK2-204ENST00000428021 RTN2O75298 545 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 CLDN11O75508 207 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 ASLP04424 464 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 EPHX1P07099 455 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 PLEKP08567 350 aaPredicted RBP17.19■□□□□ 0.34
VRK2-204ENST00000428021 CASP14P31944 242 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 ZNF143P52747 638 aaPredicted RBP17.19■□□□□ 0.34
VRK2-204ENST00000428021 CDH4P55283 916 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 OGDHQ02218 1023 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 MAMLD1Q13495 774 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 SLC12A1Q13621 1099 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 ACBD5Q5T8D3 534 aaPredicted RBP17.19■□□□□ 0.34
VRK2-204ENST00000428021 PMS2CLQ68D20 193 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 MAGEB5Q9BZ81 275 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 CD93Q9NPY3 652 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 MPP6Q9NZW5 540 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 ERVW-1Q9UQF0 538 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 TBC1D30Q9Y2I9 924 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 OR51B4Q9Y5P0 310 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 BZW2Q9Y6E2 419 aaKnown RBP17.19■□□□□ 0.34
VRK2-204ENST00000428021 RALGAPA1Q6GYQ0 2036 aa17.19■□□□□ 0.34
VRK2-204ENST00000428021 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.18■□□□□ 0.34
VRK2-204ENST00000428021 ZBTB24O43167 697 aaPredicted RBP17.18■□□□□ 0.34
VRK2-204ENST00000428021 CCP110O43303 1012 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 ATMINO43313 823 aaPredicted RBP17.18■□□□□ 0.34
VRK2-204ENST00000428021 CBFA2T2O43439 604 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 EPN2O95208 641 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 SERPING1P05155 500 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 TPM3P06753 285 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 C7P10643 843 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 NUMBP49757 651 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 ECT2LQ008S8 904 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 SPEM2Q0P670 501 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 ZNF177Q13360 481 aaPredicted RBP17.18■□□□□ 0.34
VRK2-204ENST00000428021 BYSLQ13895 437 aaKnown RBP17.18■□□□□ 0.34
VRK2-204ENST00000428021 METTL3Q86U44 580 aaKnown RBP17.18■□□□□ 0.34
VRK2-204ENST00000428021 C11orf74Q86VG3 221 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 TMPRSS6Q8IU80 811 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 KIAA2013Q8IYS2 634 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 CCDC185Q8N715 623 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 FEM1AQ9BSK4 669 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 CNPY3Q9BT09 278 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 ISCUQ9H1K1 167 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 MTG2Q9H4K7 406 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 PRDM16Q9HAZ2 1276 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 PRSS16Q9NQE7 514 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 PARVAQ9NVD7 372 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 ZNF212Q9UDV6 495 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 ADAMTS1Q9UHI8 967 aa17.18■□□□□ 0.34
VRK2-204ENST00000428021 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.18■□□□□ 0.341e-7■■□□□ 12.2
VRK2-204ENST00000428021 IGHV1OR15-9A0A0B4J2B8 117 aa17.17■□□□□ 0.34
VRK2-204ENST00000428021 FAM72CH0Y354 149 aa17.17■□□□□ 0.34
VRK2-204ENST00000428021 SRGAP2O75044 1071 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms