RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PGM3O95394 542 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 MYL9P24844 172 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 CLK3P49761 638 aaKnown RBP14.71□□□□□ -0.05
PTPN13-203ENST00000427191 BNIP2Q12982 314 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 CYP20A1Q6UW02 462 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 KCNMB4Q86W47 210 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 PNKPQ96T60 521 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 TIMMDC1Q9NPL8 285 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 IDH3BO43837 385 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 SLC26A3P40879 764 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 RHOAP61586 193 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 FGD3Q5JSP0 725 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 ADGRF2Q8IZF7 708 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 CGRRF1Q99675 332 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 DNPEPQ9ULA0 475 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 INVSQ9Y283 1065 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 PCDHA3Q9Y5H8 950 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.71□□□□□ -0.05
PTPN13-203ENST00000427191 C6orf222P0C671 652 aaPredicted RBP14.71□□□□□ -0.05
PTPN13-203ENST00000427191 RIPPLY1Q0D2K3 151 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 PEX6Q13608 980 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 CYP2A13Q16696 494 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 RUNDC3AQ59EK9 446 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 SLC44A5Q8NCS7 719 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 RNF145Q96MT1 663 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 NFKBIZQ9BYH8 718 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 CAPN10Q9HC96 672 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 S100A1P23297 94 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 ACAT1P24752 427 aaKnown RBP14.71□□□□□ -0.05
PTPN13-203ENST00000427191 KCNJ1P48048 391 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 EPHB3P54753 998 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 MED8Q96G25 268 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 ABI2Q9NYB9 513 aaPredicted RBP14.71□□□□□ -0.05
PTPN13-203ENST00000427191 VPS28Q9UK41 221 aa14.71□□□□□ -0.05
PTPN13-203ENST00000427191 TNFRSF21O75509 655 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 MTA2O94776 668 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 PROSCO94903 275 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 RHOCP08134 193 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 ADSSP30520 456 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 RAB27AP51159 221 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 HMGCS2P54868 508 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 SMYD1Q8NB12 490 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 NKX2-3Q8TAU0 364 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 ATMINO43313 823 aaPredicted RBP14.71□□□□□ -0.06
PTPN13-203ENST00000427191 PRMT3O60678 531 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 ACADMP11310 421 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 H2AFXP16104 143 aaPredicted RBP14.71□□□□□ -0.06
PTPN13-203ENST00000427191 GPR1P46091 355 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 ERMARDQ5T6L9 678 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 COX4I2Q96KJ9 171 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 CHID1Q9BWS9 393 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 C1QTNF1Q9BXJ1 281 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 PLGRKTQ9HBL7 147 aa14.71□□□□□ -0.06
PTPN13-203ENST00000427191 NSUN4Q96CB9 384 aaKnown RBP14.7□□□□□ -0.06
PTPN13-203ENST00000427191 CYLDQ9NQC7 956 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 THG1LQ9NWX6 298 aaKnown RBP14.7□□□□□ -0.06
PTPN13-203ENST00000427191 CCR1P32246 355 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 EN1Q05925 392 aaPredicted RBP14.7□□□□□ -0.06
PTPN13-203ENST00000427191 IGDCC4Q8TDY8 1250 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 SRP68Q9UHB9 627 aaKnown RBP14.7□□□□□ -0.06
PTPN13-203ENST00000427191 ACTL7BQ9Y614 415 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 SETBP1Q9Y6X0 1596 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 STK32CQ86UX6 486 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 FAM172AQ8WUF8 416 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 CRELD1Q96HD1 420 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 GPN1Q9HCN4 374 aaPredicted RBP14.7□□□□□ -0.06
PTPN13-203ENST00000427191 LRRC7Q96NW7 1537 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 TTLL13PA6NNM8 815 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 QSOX1O00391 747 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 LIN7AO14910 233 aaPredicted RBP14.7□□□□□ -0.06
PTPN13-203ENST00000427191 TLX1P31314 330 aaPredicted RBP14.7□□□□□ -0.06
PTPN13-203ENST00000427191 MAPK9P45984 424 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 CACNB3P54284 484 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 VBP1P61758 197 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 MAPK11Q15759 364 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 LYPLAL1Q5VWZ2 237 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 RETSATQ6NUM9 610 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 PEX5LQ8IYB4 626 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 ZNF276Q8N554 614 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 GPRC5AQ8NFJ5 357 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 MGAT4AQ9UM21 535 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 PDHBP11177 359 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 CYP11B2P19099 503 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 RBM43Q6ZSC3 357 aaKnown RBP14.7□□□□□ -0.06
PTPN13-203ENST00000427191 METTL3Q86U44 580 aaKnown RBP14.7□□□□□ -0.06
PTPN13-203ENST00000427191 RAPGEFL1Q9UHV5 662 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 ST3GAL5Q9UNP4 418 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 STX16-NPEPL1H3BU86 382 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 STX16O14662 325 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 CETPP11597 493 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 MPZL3Q6UWV2 235 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 PAGE2Q7Z2X7 111 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 CRAMP1Q96RY5 1269 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 NUDT5Q9UKK9 219 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 ANGPT4Q9Y264 503 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 ATXN2Q99700 1313 aaKnown RBP14.7□□□□□ -0.06
PTPN13-203ENST00000427191 A0A087X0T9 212 aa14.7□□□□□ -0.06
PTPN13-203ENST00000427191 KHDRBS3O75525 346 aaKnown RBP14.7□□□□□ -0.06
PTPN13-203ENST00000427191 RTN3O95197 1032 aaPredicted RBP14.7□□□□□ -0.06
PTPN13-203ENST00000427191 PRG2P13727 222 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms