RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 SCAPQ12770 1279 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 PAK1Q13153 545 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 ARID5BQ14865 1188 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 TAF5Q15542 800 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 TTC31Q49AM3 519 aaPredicted RBP10.4□□□□□ -0.74
GACAT3-201ENST00000426539 ZC3H12AQ5D1E8 599 aaKnown RBP10.4□□□□□ -0.74
GACAT3-201ENST00000426539 RAP1GAP2Q684P5 730 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 KIAA0895LQ68EN5 471 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 USP30Q70CQ3 517 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 TMEM110Q86TL2 294 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 DHX40Q8IX18 779 aaKnown RBP10.4□□□□□ -0.74
GACAT3-201ENST00000426539 APCDD1Q8J025 514 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 LGI2Q8N0V4 545 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 WDTC1Q8N5D0 677 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 ZNF606Q8WXB4 792 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 FAM129BQ96TA1 746 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 PRMT1Q99873 361 aaKnown RBP10.4□□□□□ -0.74
GACAT3-201ENST00000426539 DDX50Q9BQ39 737 aaKnown RBP10.4□□□□□ -0.74
GACAT3-201ENST00000426539 NEUROG2Q9H2A3 272 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 SGK2Q9HBY8 427 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 UBE2TQ9NPD8 197 aaPredicted RBP10.4□□□□□ -0.74
GACAT3-201ENST00000426539 SLCO3A1Q9UIG8 710 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 ERVW-1Q9UQF0 538 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.4□□□□□ -0.74
GACAT3-201ENST00000426539 GTF3C3Q9Y5Q9 886 aa10.4□□□□□ -0.74
GACAT3-201ENST00000426539 ITIH6Q6UXX5 1313 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 A0A1W2PP55 124 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 WNT9AO14904 365 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 MID1O15344 667 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 FLRT2O43155 660 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 SART1O43290 800 aaKnown RBP10.39□□□□□ -0.75
GACAT3-201ENST00000426539 LETM1O95202 739 aaPredicted RBP10.39□□□□□ -0.75
GACAT3-201ENST00000426539 GNA14O95837 355 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 TRUB2O95900 331 aaKnown RBP10.39□□□□□ -0.75
GACAT3-201ENST00000426539 WNT1P04628 370 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 NUDT7P0C024 238 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 TACR2P21452 398 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 CTSKP43235 329 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 NUMBP49757 651 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 GALCP54803 685 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 CDH18Q13634 790 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 KCNJ12Q14500 433 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 CST6Q15828 149 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 MEA1Q16626 185 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 NCEH1Q6PIU2 408 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 CIR1Q86X95 450 aaPredicted RBP10.39□□□□□ -0.75
GACAT3-201ENST00000426539 PROSER1Q86XN7 944 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 MARCH9Q86YJ5 346 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 MMAAQ8IVH4 418 aaKnown RBP10.39□□□□□ -0.75
GACAT3-201ENST00000426539 ZNF557Q8N988 423 aaPredicted RBP10.39□□□□□ -0.75
GACAT3-201ENST00000426539 KDM1BQ8NB78 822 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 RHBDD1Q8TEB9 315 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 IGSF8Q969P0 613 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 SLC6A18Q96N87 628 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 CRACR2AQ9BSW2 395 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 FBXL12Q9NXK8 326 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 KIAA1522Q9P206 1035 aaPredicted RBP10.39□□□□□ -0.75
GACAT3-201ENST00000426539 AJAP1Q9UKB5 411 aaPredicted RBP10.39□□□□□ -0.75
GACAT3-201ENST00000426539 APOBEC2Q9Y235 224 aaKnown RBP10.39□□□□□ -0.75
GACAT3-201ENST00000426539 SPEGQ15772 3267 aa10.39□□□□□ -0.75
GACAT3-201ENST00000426539 A0A1W2PPC4 97 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 TARSL2A2RTX5 802 aaKnown RBP10.38□□□□□ -0.75
GACAT3-201ENST00000426539 FAM47DPA6NHR8 397 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 KCNU1A8MYU2 1149 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 VILLO15195 856 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 ZZEF1O43149 2961 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 THAP12O43422 761 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 PCDHGA12O60330 932 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 SRPRAP08240 638 aaKnown RBP10.38□□□□□ -0.75
GACAT3-201ENST00000426539 VAV1P15498 845 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 SLC9A1P19634 815 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 MZF1P28698 734 aaPredicted RBP10.38□□□□□ -0.75
GACAT3-201ENST00000426539 GNA15P30679 374 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 SLC8A1P32418 973 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 STK19P49842 368 aaPredicted RBP10.38□□□□□ -0.75
GACAT3-201ENST00000426539 IRAK1P51617 712 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 METAP1P53582 386 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 ST8SIA6P61647 398 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 YWHAZP63104 245 aaKnown RBP10.38□□□□□ -0.75
GACAT3-201ENST00000426539 ECT2LQ008S8 904 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 IL9RQ01113 521 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 PDCLQ13371 301 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 BECN1Q14457 450 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 SHBQ15464 509 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 TEAD4Q15561 434 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 PRAMEF14Q5SWL7 426 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 CXorf57Q6NSI4 855 aaKnown RBP10.38□□□□□ -0.75
GACAT3-201ENST00000426539 TRIM65Q6PJ69 517 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 TMPRSS7Q7RTY8 843 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 CHSY1Q86X52 802 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 IRF2BP1Q8IU81 584 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 STK40Q8N2I9 435 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 AADATQ8N5Z0 425 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 OR52K2Q8NGK3 314 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 GANCQ8TET4 914 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 PTPRN2Q92932 1015 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 ALG14Q96F25 216 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 BTN2A3PQ96KV6 586 aa10.38□□□□□ -0.75
GACAT3-201ENST00000426539 RPL10LQ96L21 214 aaKnown RBP10.38□□□□□ -0.75
GACAT3-201ENST00000426539 SLC2A13Q96QE2 648 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms