RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 HPSEQ9Y251 543 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 COQ4Q9Y3A0 265 aa12.7□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ADAMTS9Q9P2N4 1935 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 GOLGA6L7A0A1B0GV03 622 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 F5H5T6 163 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 M0QYV0 167 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 O00370 1275 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SLC7A4O43246 635 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 LUC7L3O95232 432 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ALPPL2P10696 532 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 EIF2S3P41091 472 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 RXRGP48443 463 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PSMD8P48556 350 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 RGS7P49802 495 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MCCD1P59942 119 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 DAB2P98082 770 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 LRRC63Q05C16 580 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ELAVL3Q14576 367 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MS4A13Q5J8X5 152 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PITRM1Q5JRX3 1037 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 RABGAP1LQ5R372 815 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PRAMEF14Q5SWL7 426 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 NAPEPLDQ6IQ20 393 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 GPR155Q7Z3F1 870 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ZNF605Q86T29 641 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 LSMEM2Q8N112 164 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PPM1KQ8N3J5 372 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SAP25Q8TEE9 199 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 OR8D1Q8WZ84 308 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 BTN2A3PQ96KV6 586 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CCDC114Q96M63 670 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 GSDMAQ96QA5 445 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SPAG5Q96R06 1193 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SLC25A13Q9UJS0 675 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ATRXP46100 2492 aa12.69□□□□□ -0.38
HLA-DQB3-203ENST00000425319 TEX51A0A1B0GUA7 166 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 A0A1W2PQ27 194 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 A0A1W2PQ64 194 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PRAMEF26H0Y7S4 382 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 TULP2O00295 520 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 RNGTTO60942 597 aaKnown RBP12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MOCS2O96007 188 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 GLDCP23378 1020 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 DUSP3P51452 185 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 RTP5Q14D33 572 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CCDC40Q4G0X9 1142 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SETMARQ53H47 684 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 C9orf64Q5T6V5 341 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 HES3Q5TGS1 186 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ZNF658Q5TYW1 1059 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 TTC39BQ5VTQ0 682 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 LAYNQ6UX15 382 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CHSY1Q86X52 802 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 LGI2Q8N0V4 545 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 FAM174AQ8TBP5 190 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 EEF2KMTQ96G04 330 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 KLHDC7BQ96G42 594 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 P2RY11Q96G91 374 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ABCG4Q9H172 646 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 DYRK4Q9NR20 520 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CLCA2Q9UQC9 943 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CEP192Q8TEP8 1941 aa12.68□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CFAP47Q6ZTR5 3102 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 NEMP2A6NFY4 417 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 TTC34A8MYJ7 566 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PIK3R2O00459 728 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PSMA7O14818 248 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 P4HA2O15460 535 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 IGLV3-27P01718 113 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 EPHA8P29322 1005 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 UCNP55089 124 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 NXPH1P58417 271 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ZCWPW2Q504Y3 356 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 DCAF6Q58WW2 860 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PMF1Q6P1K2 205 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 BEND5Q7L4P6 421 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 MARCH9Q86YJ5 346 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CFAP52Q8N1V2 620 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 STK40Q8N2I9 435 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 FAM81BQ96LP2 452 aa12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 FCRL3Q96P31 734 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 FAM237AA0A1B0GTK4 181 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ATXN7O15265 892 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 SLC6A4P31645 630 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 PRCPP42785 496 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 RPS24P62847 133 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 KRT83P78385 493 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CDK17Q00537 523 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 DNAJC3Q13217 504 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 ZNF177Q13360 481 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CBWD6Q4V339 395 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 TAF1BQ53T94 588 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 FAM133BQ5BKY9 247 aaKnown RBP12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CBWD3Q5JTY5 395 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 KCNT1Q5JUK3 1230 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 CBWD5Q5RIA9 395 aa12.66□□□□□ -0.38
HLA-DQB3-203ENST00000425319 BHLHA9Q7RTU4 235 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms