RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 GOLGA6L7A0A1B0GV03 622 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 BCLAF3A2AJT9 711 aaKnown RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 LINC01565O15544 149 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 CTIFO43310 598 aaKnown RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 STK10O94804 968 aaKnown RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 ECEL1O95672 775 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 MAPKAPK2P49137 400 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 CBX2Q14781 532 aaPredicted RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 PPP1R7Q15435 360 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 NCBP2-AS2Q69YL0 99 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 Q6ZNB5 142 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 CHST9Q7L1S5 443 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 CDKL3Q8IVW4 592 aaPredicted RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 FAM217AQ8IXS0 508 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 IFT20Q8IY31 132 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 ZNF683Q8IZ20 524 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 UMODL1-AS1Q8N2C9 162 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 RTL3Q8N8U3 475 aaKnown RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 CCDC89Q8N998 374 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 NOA1Q8NC60 698 aaKnown RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 CCNYQ8ND76 341 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 ITFG1Q8TB96 612 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 ZSCAN18Q8TBC5 510 aaPredicted RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 TFB1MQ8WVM0 346 aaKnown RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 RUBCNQ92622 972 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 SMARCD2Q92925 531 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 USP13Q92995 863 aaPredicted RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 HERPUD2Q9BSE4 406 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 TMEM248Q9NWD8 314 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 DTLQ9NZJ0 730 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 CLEC1BQ9P126 229 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 SAE1Q9UBE0 346 aaPredicted RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 AMACRQ9UHK6 382 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 XPO7Q9UIA9 1087 aaKnown RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 DNPEPQ9ULA0 475 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 CDH7Q9ULB5 785 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 R3HDM2Q9Y2K5 976 aaKnown RBP10.62□□□□□ -0.71
MDC1-205ENST00000425072 SNX10Q9Y5X0 201 aa10.62□□□□□ -0.71
MDC1-205ENST00000425072 CHD7Q9P2D1 2997 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 ARHGAP42A6NI28 874 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 GREM1O60565 184 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 CEBPBP17676 345 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 CCNCP24863 283 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 OR1E1P30953 314 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 ETFBP38117 255 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 KCNJ1P48048 391 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 COL19A1Q14993 1142 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 OASLQ15646 514 aaKnown RBP10.61□□□□□ -0.71
MDC1-205ENST00000425072 ERCC6LQ2NKX8 1250 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 FAM133BQ5BKY9 247 aaKnown RBP10.61□□□□□ -0.71
MDC1-205ENST00000425072 STXBP5Q5T5C0 1151 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 C6orf118Q5T5N4 469 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 NADSYN1Q6IA69 706 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 ZNF783Q6ZMS7 281 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 SETD3Q86TU7 594 aaPredicted RBP10.61□□□□□ -0.71
MDC1-205ENST00000425072 ZC3H18Q86VM9 953 aaKnown RBP10.61□□□□□ -0.71
MDC1-205ENST00000425072 NLRP14Q86W24 1093 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 MICALL1Q8N3F8 863 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 TDRD5Q8NAT2 981 aaKnown RBP10.61□□□□□ -0.71
MDC1-205ENST00000425072 HJURPQ8NCD3 748 aaPredicted RBP10.61□□□□□ -0.71
MDC1-205ENST00000425072 BBOF1Q8ND07 529 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 ADAMTS19Q8TE59 1207 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 DDI1Q8WTU0 396 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 NSMCE1Q8WV22 266 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 FGF13Q92913 245 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 IGSF8Q969P0 613 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 LRRC45Q96CN5 670 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 CCDC114Q96M63 670 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 ZSWIM3Q96MP5 696 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 TSGA13Q96PP4 275 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 VAT1Q99536 393 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 ERP44Q9BS26 406 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 APOL5Q9BWW9 433 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 MAGEH1Q9H213 219 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 TRPV4Q9HBA0 871 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 ZFP14Q9HCL3 533 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 ETNK2Q9NVF9 386 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 MPP6Q9NZW5 540 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 HPCAL4Q9UM19 191 aa10.61□□□□□ -0.71
MDC1-205ENST00000425072 ATG2AQ2TAZ0 1938 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 A0A1B0GVM2 712 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 ILVBLA1L0T0 632 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 TCAF2A6NFQ2 919 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 H0Y626 953 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 SGK1O00141 431 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 RAD51CO43502 376 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 KRT14P02533 472 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 RHOXF2BP0C7M4 288 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 ITIH2P19823 946 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 SLC6A4P31645 630 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 PTGIRP43119 386 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 ZXDBP98169 803 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 GBE1Q04446 702 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 GALNT2Q10471 571 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 SLC10A2Q12908 348 aaPredicted RBP10.6□□□□□ -0.71
MDC1-205ENST00000425072 NR1H3Q13133 447 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 SLC12A1Q13621 1099 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 ADGRE1Q14246 886 aa10.6□□□□□ -0.71
MDC1-205ENST00000425072 POLD3Q15054 466 aaPredicted RBP10.6□□□□□ -0.71
MDC1-205ENST00000425072 PARP15Q460N3 678 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms