RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 TARSL2A2RTX5 802 aaKnown RBP18.33■□□□□ 0.52
GPC1-203ENST00000425056 KCNU1A8MYU2 1149 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 F5H5T6 163 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 RNASEH1O60930 286 aaKnown RBP18.33■□□□□ 0.52
GPC1-203ENST00000425056 FSBPO95073 299 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 IGHV4-34P06331 123 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 GLI1P08151 1106 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 SLC9A1P19634 815 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 CTSOP43234 321 aaPredicted RBP18.33■□□□□ 0.52
GPC1-203ENST00000425056 ECT2LQ008S8 904 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 EXOC3L4Q17RC7 722 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 KIF19Q2TAC6 998 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 KIAA0895LQ68EN5 471 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 GBP6Q6ZN66 633 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 ATP6V0D2Q8N8Y2 350 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 SETD7Q8WTS6 366 aaKnown RBP18.33■□□□□ 0.52
GPC1-203ENST00000425056 SLC2A13Q96QE2 648 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 CPXM1Q96SM3 734 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 PRMT1Q99873 361 aaKnown RBP18.33■□□□□ 0.52
GPC1-203ENST00000425056 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.33■□□□□ 0.52
GPC1-203ENST00000425056 ASNSD1Q9NWL6 643 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 FBXL12Q9NXK8 326 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 PCDHGC3Q9UN70 934 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 APOBEC2Q9Y235 224 aaKnown RBP18.33■□□□□ 0.52
GPC1-203ENST00000425056 NCKAP1Q9Y2A7 1128 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 ANKRD6Q9Y2G4 727 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 SNX11Q9Y5W9 270 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 PTPRBP23467 1997 aa18.33■□□□□ 0.52
GPC1-203ENST00000425056 PKD1L2Q7Z442 2459 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 EDDM13A0A1B0GTR0 161 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 TTC34A8MYJ7 566 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 C10orf142B7Z368 130 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 MID1O15344 667 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 UBE2HP62256 183 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 APBA1Q02410 837 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 SFSWAPQ12872 951 aaKnown RBP18.32■□□□□ 0.52
GPC1-203ENST00000425056 SLC12A1Q13621 1099 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 TAF5Q15542 800 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 ARHGAP44Q17R89 818 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 TTC39BQ5VTQ0 682 aaPredicted RBP18.32■□□□□ 0.52
GPC1-203ENST00000425056 LAYNQ6UX15 382 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 IRF2BP1Q8IU81 584 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 APCDD1Q8J025 514 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 WDTC1Q8N5D0 677 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 IGSF8Q969P0 613 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 FAM204AQ9H8W3 233 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 ADAMTS1Q9UHI8 967 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 FZD4Q9ULV1 537 aa18.32■□□□□ 0.52
GPC1-203ENST00000425056 PLXNB3Q9ULL4 1909 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 A0A1B0GVM2 712 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 A0A1W2PP55 124 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 TCAF2A6NFQ2 919 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 SRRM3A6NNA2 597 aaPredicted RBP18.31■□□□□ 0.52
GPC1-203ENST00000425056 HSF2BPO75031 334 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 SLC2A3P11169 496 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 PON1P27169 355 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 CCR1P32246 355 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 USP8P40818 1118 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 GALCP54803 685 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 CDK17Q00537 523 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 CAMK4Q16566 473 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 EFHC1Q5JVL4 640 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 RNF219Q5W0B1 726 aaPredicted RBP18.31■□□□□ 0.52
GPC1-203ENST00000425056 MMAAQ8IVH4 418 aaKnown RBP18.31■□□□□ 0.52
GPC1-203ENST00000425056 DEFB106AQ8N104 65 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 CCAR2Q8N163 923 aaKnown RBP18.31■□□□□ 0.52
GPC1-203ENST00000425056 PNPLA1Q8N8W4 532 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 GANCQ8TET4 914 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 PPP1R13BQ96KQ4 1090 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 CDC6Q99741 560 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 DDIT4Q9NX09 232 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 SLC12A6Q9UHW9 1150 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 SLCO3A1Q9UIG8 710 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 CEP83Q9Y592 693 aa18.31■□□□□ 0.52
GPC1-203ENST00000425056 A0A1W2PPC4 97 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 DKK1O94907 266 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 ABCB4P21439 1286 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 CTSKP43235 329 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 STK19P49842 368 aaPredicted RBP18.3■□□□□ 0.52
GPC1-203ENST00000425056 CCT8P50990 548 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 RACK1P63244 317 aaKnown RBP18.3■□□□□ 0.52
GPC1-203ENST00000425056 RABGAP1LQ5R372 815 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 NCEH1Q6PIU2 408 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 OLFML1Q6UWY5 402 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 SLCO6A1Q86UG4 719 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 CIR1Q86X95 450 aaPredicted RBP18.3■□□□□ 0.52
GPC1-203ENST00000425056 CREBRFQ8IUR6 639 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 PASD1Q8IV76 773 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 OR2T34Q8NGX1 318 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 PTPRN2Q92932 1015 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 RPL10LQ96L21 214 aaKnown RBP18.3■□□□□ 0.52
GPC1-203ENST00000425056 NOX5Q96PH1 765 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 FAM129BQ96TA1 746 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 NEUROG2Q9H2A3 272 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 SIX2Q9NPC8 291 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 TOR4AQ9NXH8 423 aa18.3■□□□□ 0.52
GPC1-203ENST00000425056 AJAP1Q9UKB5 411 aaPredicted RBP18.3■□□□□ 0.52
GPC1-203ENST00000425056 FAM47DPA6NHR8 397 aa18.29■□□□□ 0.52
GPC1-203ENST00000425056 LRRC72A6NJI9 287 aa18.29■□□□□ 0.52
GPC1-203ENST00000425056 PCDHGA12O60330 932 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms