RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 TMEM51Q9NW97 253 aa17.11■□□□□ 0.33
SHANK2-207ENST00000425049 ERVW-1Q9UQF0 538 aa17.11■□□□□ 0.33
SHANK2-207ENST00000425049 NCKAP1Q9Y2A7 1128 aa17.11■□□□□ 0.33
SHANK2-207ENST00000425049 A0A1B0GTW7 788 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 PDGFRAP16234 1089 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 CSRP1P21291 193 aaKnown RBP17.1■□□□□ 0.33
SHANK2-207ENST00000425049 MAOBP27338 520 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 SCNN1AP37088 669 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 RPS14P62263 151 aaKnown RBP17.1■□□□□ 0.33
SHANK2-207ENST00000425049 MYL5Q02045 173 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 SULT2A1Q06520 285 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 ZNF252P-AS1Q0IIN9 211 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 EIF4EBP2Q13542 120 aaPredicted RBP17.1■□□□□ 0.33
SHANK2-207ENST00000425049 HNRNPA1L2Q32P51 320 aaKnown RBP17.1■□□□□ 0.33
SHANK2-207ENST00000425049 CCDC183Q5T5S1 534 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 DPY19L2P1Q6NXN4 242 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 NOP9Q86U38 636 aaKnown RBP17.1■□□□□ 0.33
SHANK2-207ENST00000425049 CIR1Q86X95 450 aaPredicted RBP17.1■□□□□ 0.33
SHANK2-207ENST00000425049 DHX40Q8IX18 779 aaKnown RBP17.1■□□□□ 0.33
SHANK2-207ENST00000425049 MINDY1Q8N5J2 469 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 PRMT1Q99873 361 aaKnown RBP17.1■□□□□ 0.33
SHANK2-207ENST00000425049 FANCLQ9NW38 375 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 INTS6Q9UL03 887 aaKnown RBP17.1■□□□□ 0.33
SHANK2-207ENST00000425049 VANGL2Q9ULK5 521 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 SCML1Q9UN30 329 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 DAAM1Q9Y4D1 1078 aa17.1■□□□□ 0.33
SHANK2-207ENST00000425049 MUC22E2RYF6 1773 aaPredicted RBP17.1■□□□□ 0.33
SHANK2-207ENST00000425049 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-207ENST00000425049 EDDM13A0A1B0GTR0 161 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 FAM170AA1A519 330 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 METTL12A8MUP2 240 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 GOLGA8SH3BPF8 625 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 BCAT2O15382 392 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-207ENST00000425049 SIN3BO75182 1162 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 GFPT2O94808 682 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 SEMA4FO95754 770 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 F9P00740 461 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 CEACAM1P13688 526 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 CDK11BP21127 795 aaKnown RBP17.09■□□□□ 0.33
SHANK2-207ENST00000425049 POLR2FP61218 127 aaKnown RBP17.09■□□□□ 0.33
SHANK2-207ENST00000425049 CENPCQ03188 943 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 DEUP1Q05D60 604 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 ZNF177Q13360 481 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-207ENST00000425049 AUHQ13825 339 aaKnown RBP17.09■□□□□ 0.33
SHANK2-207ENST00000425049 BRMS1LQ5PSV4 323 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 FBXL22Q6P050 247 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 ZNF677Q86XU0 584 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 EPS8L1Q8TE68 723 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 DNASE2BQ8WZ79 361 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 ZDHHC5Q9C0B5 715 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 SIK2Q9H0K1 926 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 RSPH9Q9H1X1 276 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-207ENST00000425049 GANQ9H2C0 597 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 WDCPQ9H6R7 721 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 SGK2Q9HBY8 427 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 ANGPTL2Q9UKU9 493 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 CEP192Q8TEP8 1941 aa17.09■□□□□ 0.33
SHANK2-207ENST00000425049 PI4KAP42356 2102 aa17.08■□□□□ 0.33
SHANK2-207ENST00000425049 TARSL2A2RTX5 802 aaKnown RBP17.08■□□□□ 0.32
SHANK2-207ENST00000425049 PAGE1O75459 146 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 MMEP08473 750 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 CTSOP43234 321 aaPredicted RBP17.08■□□□□ 0.32
SHANK2-207ENST00000425049 GABRB2P47870 512 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 NAA35Q5VZE5 725 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 XYLT1Q86Y38 959 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 APCDD1Q8J025 514 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 DEFB124Q8NES8 71 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 CPA5Q8WXQ8 436 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 MYO19Q96H55 970 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 MRGPRX3Q96LB0 322 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 NPY6RQ99463 290 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 TKTL2Q9H0I9 626 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 PABPC3Q9H361 631 aaKnown RBP17.08■□□□□ 0.32
SHANK2-207ENST00000425049 MTG2Q9H4K7 406 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 NLRC4Q9NPP4 1024 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 PIGVQ9NUD9 493 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 EIF2B4Q9UI10 523 aaKnown RBP17.08■□□□□ 0.32
SHANK2-207ENST00000425049 SLC25A13Q9UJS0 675 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 HS3ST4Q9Y661 456 aa17.08■□□□□ 0.32
SHANK2-207ENST00000425049 ITIH6Q6UXX5 1313 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 TTC34A8MYJ7 566 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 CLDN11O75508 207 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 FSBPO95073 299 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 ACSL1P33121 698 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 SOX5P35711 763 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 GGCXP38435 758 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 STAT1P42224 750 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 KLK7P49862 253 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 COPB1P53618 953 aaKnown RBP17.07■□□□□ 0.32
SHANK2-207ENST00000425049 NOMO3P69849 1222 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 GRIK2Q13002 908 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 ARID5BQ14865 1188 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 SYCP1Q15431 976 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 CST6Q15828 149 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 SLC25A52Q3SY17 297 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 LRRC31Q6UY01 552 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 TRIM72Q6ZMU5 477 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 USP30Q70CQ3 517 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 NEK11Q8NG66 645 aa17.07■□□□□ 0.32
SHANK2-207ENST00000425049 IGSF8Q969P0 613 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms