RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 LRCH4O75427 683 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 HSPA4LO95757 839 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 CHRNA5P30532 468 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 NPTX2P47972 431 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 CAMK2BQ13554 666 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 DLG2Q15700 870 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 UBR7Q8N806 425 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 TMEM102Q8N9M5 508 aaPredicted RBP11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 KYQ8NBH2 561 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 TAMM41Q96BW9 452 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 SGF29Q96ES7 293 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 MASTLQ96GX5 879 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 APBA2Q99767 749 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 SLC39A3Q9BRY0 314 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 KLC2Q9H0B6 622 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 POPDC2Q9HBU9 364 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 SCHIP1Q9P0W5 487 aaPredicted RBP11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 SLC27A5Q9Y2P5 690 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 SCINQ9Y6U3 715 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 ANKRD12Q6UB98 2062 aa11.56□□□□□ -0.56
SEC61A1-202ENST00000424880 MCF2P10911 925 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 RALBP11234 206 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 TFE3P19532 575 aaPredicted RBP11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 PIK3R1P27986 724 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 RBL1P28749 1068 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 HMOX2P30519 316 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 MLLT10P55197 1068 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 ART3Q13508 389 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 SEPT6Q14141 434 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 IKBKEQ14164 716 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 PLCL1Q15111 1095 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 SNRNP48Q6IEG0 339 aaKnown RBP11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 MOXD1Q6UVY6 613 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 LYSMD3Q7Z3D4 306 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 PLD6Q8N2A8 252 aaKnown RBP11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 PARP8Q8N3A8 854 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 TRIM11Q96F44 468 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 MAGEB5Q9BZ81 275 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 KLHL25Q9H0H3 589 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 CAB39LQ9H9S4 337 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 WDR41Q9HAD4 459 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 ZNF219Q9P2Y4 722 aaPredicted RBP11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 AP4E1Q9UPM8 1137 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 GIT1Q9Y2X7 761 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 DYTNA2CJ06 578 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 SLC15A5A6NIM6 579 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 SOCS2O14508 198 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 NCAM1P13591 858 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 OSBPP22059 807 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 KDELR1P24390 212 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 YWHABP31946 246 aaKnown RBP11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 PPARGP37231 505 aaPredicted RBP11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 GRIA3P42263 894 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 ALDH3B2P48448 385 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 NLRP11P59045 1033 aaKnown RBP11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 OLIG2Q13516 323 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 LGSNQ5TDP6 509 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 GPAT2Q6NUI2 795 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 TTC33Q6PID6 262 aaPredicted RBP11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 ADCY4Q8NFM4 1077 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 IL31RAQ8NI17 732 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 MTG1Q9BT17 334 aaPredicted RBP11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 HGH1Q9BTY7 390 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 SLC2A11Q9BYW1 496 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 RPF2Q9H7B2 306 aaKnown RBP11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 DBNDD1Q9H9R9 158 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 IGSF9Q9P2J2 1179 aa11.55□□□□□ -0.56
SEC61A1-202ENST00000424880 CCDC78A2IDD5 438 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 KRBA1A5PL33 1030 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 DDTLA6NHG4 134 aaPredicted RBP11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 GOLGA8TH3BQL2 631 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 MT-CO1P00395 513 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 APOEP02649 317 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 ATP5BP06576 529 aaKnown RBP11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 ITGB5P18084 799 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 ACO1P21399 889 aaKnown RBP11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 MMP8P22894 467 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 CRHR1P34998 444 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 ESRRGP62508 458 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 KCNJ8Q15842 424 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 TRIM16LQ309B1 348 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 DCLRE1AQ6PJP8 1040 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 FLAD1Q8NFF5 587 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 OR5B17Q8NGF7 314 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 FBXL20Q96IG2 436 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 TRIM8Q9BZR9 551 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 DHX35Q9H5Z1 703 aaKnown RBP11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 POLR1BQ9H9Y6 1135 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 CCPG1Q9ULG6 757 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 COQ4Q9Y3A0 265 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 VNN1O95497 513 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 MPSTP25325 297 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 GTF2BQ00403 316 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 GCNT1Q02742 428 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 CDK18Q07002 472 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 ZNF829Q3KNS6 432 aaPredicted RBP11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 PIGGQ5H8A4 983 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 RWDD4Q6NW29 188 aaKnown RBP11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 RNF19BQ6ZMZ0 732 aa11.54□□□□□ -0.56
SEC61A1-202ENST00000424880 TRPC4APQ8TEL6 797 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms