RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 AJAP1Q9UKB5 411 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-203ENST00000423653 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.34■□□□□ 0.37
CCDC78-203ENST00000423653 TARSL2A2RTX5 802 aaKnown RBP17.33■□□□□ 0.36
CCDC78-203ENST00000423653 SIN3BO75182 1162 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 GJB3O75712 270 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 GRAP2O75791 330 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 ERBB2P04626 1255 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 CD59P13987 128 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 EEF1GP26641 437 aaKnown RBP17.33■□□□□ 0.36
CCDC78-203ENST00000423653 CLCN1P35523 988 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 MATKP42679 507 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 SLC6A3Q01959 620 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 SULT2A1Q06520 285 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 PTPN20Q4JDL3 420 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 HSP90AA4PQ58FG1 418 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 MMS22LQ6ZRQ5 1243 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 DHX40Q8IX18 779 aaKnown RBP17.33■□□□□ 0.36
CCDC78-203ENST00000423653 CCAR2Q8N163 923 aaKnown RBP17.33■□□□□ 0.36
CCDC78-203ENST00000423653 WDTC1Q8N5D0 677 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 TMEM35BQ8NCS4 154 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 MSANTD4Q8NCY6 345 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 ZNF397Q8NF99 534 aaPredicted RBP17.33■□□□□ 0.36
CCDC78-203ENST00000423653 MRGPRX3Q96LB0 322 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 RPRD1AQ96P16 312 aaPredicted RBP17.33■□□□□ 0.36
CCDC78-203ENST00000423653 PRMT1Q99873 361 aaKnown RBP17.33■□□□□ 0.36
CCDC78-203ENST00000423653 TMEM51Q9NW97 253 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 STAP1Q9ULZ2 295 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 CACNA1BQ00975 2339 aa17.33■□□□□ 0.36
CCDC78-203ENST00000423653 MAP1BP46821 2468 aaKnown RBP17.32■□□□□ 0.36
CCDC78-203ENST00000423653 SPAARA0A1B0GVQ0 90 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 FOXN3O00409 490 aaPredicted RBP17.32■□□□□ 0.36
CCDC78-203ENST00000423653 TRIM16O95361 564 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 TPM2P07951 284 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 ZNF883P0CG24 379 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 PNMA6AP0CW24 399 aaPredicted RBP17.32■□□□□ 0.36
CCDC78-203ENST00000423653 PDGFRAP16234 1089 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 NOS2P35228 1153 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 GRIA4P48058 902 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 NME3Q13232 169 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 DRAP1Q14919 205 aaPredicted RBP17.32■□□□□ 0.36
CCDC78-203ENST00000423653 CST6Q15828 149 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 NAXDQ8IW45 347 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 ADAM33Q9BZ11 813 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 GAREM1Q9H706 876 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 OSGEPQ9NPF4 335 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 PAXBP1Q9Y5B6 917 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 PCDHB9Q9Y5E1 797 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 FHOD1Q9Y613 1164 aa17.32■□□□□ 0.36
CCDC78-203ENST00000423653 FSBPO95073 299 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 LSM8O95777 96 aaKnown RBP17.31■□□□□ 0.36
CCDC78-203ENST00000423653 ADH1BP00325 375 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 CD27P26842 260 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 SCNN1AP37088 669 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 CTSOP43234 321 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-203ENST00000423653 ELAVL3Q14576 367 aaKnown RBP17.31■□□□□ 0.36
CCDC78-203ENST00000423653 ZNF423Q2M1K9 1284 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 TCP11X2Q5H9J9 407 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 C9orf64Q5T6V5 341 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 KLHDC7AQ5VTJ3 777 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 UNQ6494/PRO21346Q6UXR6 183 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 SND1Q7KZF4 910 aaKnown RBP eCLIP17.31■□□□□ 0.36
CCDC78-203ENST00000423653 CIR1Q86X95 450 aaPredicted RBP17.31■□□□□ 0.36
CCDC78-203ENST00000423653 C1orf216Q8TAB5 229 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 MTG2Q9H4K7 406 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 PLCB1Q9NQ66 1216 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 FBXL12Q9NXK8 326 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 FZD4Q9ULV1 537 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 WASF3Q9UPY6 502 aa17.31■□□□□ 0.36
CCDC78-203ENST00000423653 LRRC72A6NJI9 287 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 TTC34A8MYJ7 566 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 M0QYT0 321 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 MID1O15344 667 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 SH3BP5O60239 455 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 UCHL3P15374 230 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 CYP11B1P15538 503 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 CDH5P33151 784 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-203ENST00000423653 CENPCQ03188 943 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 AUHQ13825 339 aaKnown RBP17.3■□□□□ 0.36
CCDC78-203ENST00000423653 BRMS1LQ5PSV4 323 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 ACBD5Q5T8D3 534 aaPredicted RBP17.3■□□□□ 0.36
CCDC78-203ENST00000423653 FBXL22Q6P050 247 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 CLEC17AQ6ZS10 378 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 ADAT2Q7Z6V5 191 aaKnown RBP17.3■□□□□ 0.36
CCDC78-203ENST00000423653 DSG4Q86SJ6 1040 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 MMAAQ8IVH4 418 aaKnown RBP17.3■□□□□ 0.36
CCDC78-203ENST00000423653 APCDD1Q8J025 514 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 BIRC7Q96CA5 298 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 RPL10LQ96L21 214 aaKnown RBP17.3■□□□□ 0.36
CCDC78-203ENST00000423653 OMDQ99983 421 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 SCNM1Q9BWG6 230 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 TM9SF3Q9HD45 589 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCDC78-203ENST00000423653 SLC25A13Q9UJS0 675 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 VANGL2Q9ULK5 521 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 TPX2Q9ULW0 747 aaKnown RBP17.3■□□□□ 0.36
CCDC78-203ENST00000423653 NUMA1Q14980 2115 aa17.3■□□□□ 0.36
CCDC78-203ENST00000423653 CEP295Q9C0D2 2601 aa17.29■□□□□ 0.36
CCDC78-203ENST00000423653 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.29■□□□□ 0.36
CCDC78-203ENST00000423653 A0A1B0GVT2 93 aa17.29■□□□□ 0.36
CCDC78-203ENST00000423653 A0A1W2PP55 124 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms