RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 KCTD13Q8WZ19 329 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 SEMA4DQ92854 862 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 FAM131CQ96AQ9 280 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 IPO9Q96P70 1041 aaKnown RBP17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 EXOC1Q9NV70 894 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 FAM13BQ9NYF5 915 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 ERVW-1Q9UQF0 538 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 EDDM13A0A1B0GTR0 161 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 TTC34A8MYJ7 566 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 B8ZZF3 427 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 MAGEC1O60732 1142 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 DXOO77932 396 aaKnown RBP17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 ADH1BP00325 375 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 NUDT1P36639 197 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 PCBP4P57723 403 aaKnown RBP17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 ADIGQ0VDE8 80 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 BROXQ5VW32 411 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 RESP18Q5W5W9 173 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 NUGGCQ68CJ6 796 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 KDM7AQ6ZMT4 941 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 KDM4CQ9H3R0 1056 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 CNGB3Q9NQW8 809 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 STIM2Q9P246 746 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 TSPAN16Q9UKR8 245 aa17.35■□□□□ 0.37
CHCHD3-202ENST00000423635 TBC1D3DA0A087WVF3 549 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 TBC1D3IA0A087WXS9 549 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 TBC1D3EA0A087X179 549 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 TBC1D3KA0A087X1G2 549 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 TBC1D3FA6NER0 549 aaPredicted RBP17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 TBC1D3LB9A6J9 549 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 TRIM38O00635 465 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 SIGLEC6O43699 453 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 TBC1D3HP0C7X1 549 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 KRT13P13646 458 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 PPP2CBP62714 309 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 PPP2CAP67775 309 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 BST2Q10589 180 aaKnown RBP17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 CDCP2Q5VXM1 449 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 TBC1D3GQ6DHY5 549 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 NADSYN1Q6IA69 706 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 TBC1D3CQ6IPX1 549 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 PRPF39Q86UA1 669 aaKnown RBP17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 CEP57L1Q8IYX8 460 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 TBC1D3Q8IZP1 549 aaPredicted RBP17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 SLC25A45Q8N413 288 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 HJURPQ8NCD3 748 aaPredicted RBP17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 PTPRN2Q92932 1015 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 TATDN2Q93075 761 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 PAGE5Q96GU1 130 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 SEMA4CQ9C0C4 833 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 CLMPQ9H6B4 373 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 RAB20Q9NX57 234 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 SERTAD1Q9UHV2 236 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 SLCO3A1Q9UIG8 710 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 PCDHA7Q9UN72 937 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 DMTF1Q9Y222 760 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 SSUH2Q9Y2M2 353 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 PCDHB1Q9Y5F3 818 aa17.34■□□□□ 0.37
CHCHD3-202ENST00000423635 C6P13671 934 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 NR2F2P24468 414 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 DRD3P35462 400 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 PSMC2P35998 433 aaKnown RBP17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 CTSOP43234 321 aaPredicted RBP17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 PSMD8P48556 350 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 DAOAP59103 153 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 ERVPABLB-1P60509 514 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 GOLGA7BQ2TAP0 167 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 FSCBQ5H9T9 825 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 PITRM1Q5JRX3 1037 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 ARHGAP40Q5TG30 622 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 FAM186BQ8IYM0 893 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 STK40Q8N2I9 435 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 TTC9Q92623 222 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 MYEOVQ96EZ4 313 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 PRICKLE1Q96MT3 831 aaPredicted RBP17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 DDX50Q9BQ39 737 aaKnown RBP17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 MMRN2Q9H8L6 949 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 CPNE5Q9HCH3 593 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 HESX1Q9UBX0 185 aa17.33■□□□□ 0.36
CHCHD3-202ENST00000423635 ACTN4O43707 911 aaKnown RBP17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 MZF1P28698 734 aaPredicted RBP17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 TBX4P57082 545 aa17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 RPS24P62847 133 aaKnown RBP17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 ECT2LQ008S8 904 aa17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 ELAVL3Q14576 367 aaKnown RBP17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 SGO2Q562F6 1265 aa17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 SIX6OS1Q8N1H7 587 aa17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 CARNMT1Q8N4J0 409 aa17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 FAM181AQ8N9Y4 354 aa17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 FBXL13Q8NEE6 735 aa17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 IRGQQ8WZA9 623 aa17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 NAF1Q96HR8 494 aaKnown RBP17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 DPH1Q9BZG8 443 aa17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 CYTH4Q9UIA0 394 aa17.32■□□□□ 0.36
CHCHD3-202ENST00000423635 TYW5A2RUC4 315 aaKnown RBP17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 SLC7A4O43246 635 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 SDC3O75056 442 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 MOCS3O95396 460 aa17.31■□□□□ 0.36
CHCHD3-202ENST00000423635 IL1BP01584 269 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms