RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 BTN2A3PQ96KV6 586 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 KREMEN1Q96MU8 473 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 POPDC2Q9HBU9 364 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 KIAA1522Q9P206 1035 aaPredicted RBP16.71■□□□□ 0.27
COL18A1-205ENST00000423214 INTS6Q9UL03 887 aaKnown RBP16.71■□□□□ 0.27
COL18A1-205ENST00000423214 ERVW-1Q9UQF0 538 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 BTBD3Q9Y2F9 522 aa16.71■□□□□ 0.27
COL18A1-205ENST00000423214 ITIH6Q6UXX5 1313 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 PPP1R3GB7ZBB8 358 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 E5RJQ4 531 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 F5H5T6 163 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 FYNP06241 537 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 ATXN1LP0C7T5 689 aaKnown RBP16.7■□□□□ 0.26
COL18A1-205ENST00000423214 TACR2P21452 398 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 CTSOP43234 321 aaPredicted RBP16.7■□□□□ 0.26
COL18A1-205ENST00000423214 PSMD8P48556 350 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 RACK1P63244 317 aaKnown RBP16.7■□□□□ 0.26
COL18A1-205ENST00000423214 ECT2LQ008S8 904 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 IL9RQ01113 521 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 FSCBQ5H9T9 825 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 DENND1BQ6P3S1 775 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 NCEH1Q6PIU2 408 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 LRSAM1Q6UWE0 723 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 BEND5Q7L4P6 421 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 MMAAQ8IVH4 418 aaKnown RBP16.7■□□□□ 0.26
COL18A1-205ENST00000423214 GALNT15Q8N3T1 639 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 ATP6V0D2Q8N8Y2 350 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 MRGPRX3Q96LB0 322 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 FAM204AQ9H8W3 233 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 UBE2TQ9NPD8 197 aaPredicted RBP16.7■□□□□ 0.26
COL18A1-205ENST00000423214 AASDHPPTQ9NRN7 309 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 SERGEFQ9UGK8 458 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 FZD4Q9ULV1 537 aa16.7■□□□□ 0.26
COL18A1-205ENST00000423214 DOCK4Q8N1I0 1966 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 A0A1W2PPC4 97 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 TARSL2A2RTX5 802 aaKnown RBP16.69■□□□□ 0.26
COL18A1-205ENST00000423214 TTC34A8MYJ7 566 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 H0Y8X5 98 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 DFNA5O60443 496 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 FGFR1OPO95684 399 aaKnown RBP16.69■□□□□ 0.26
COL18A1-205ENST00000423214 TRUB2O95900 331 aaKnown RBP16.69■□□□□ 0.26
COL18A1-205ENST00000423214 ADH1BP00325 375 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 IGHV4-34P06331 123 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 NNMTP40261 264 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 CTSKP43235 329 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 RPL34P49207 117 aaKnown RBP16.69■□□□□ 0.26
COL18A1-205ENST00000423214 GALCP54803 685 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 MARSP56192 900 aaKnown RBP16.69■□□□□ 0.26
COL18A1-205ENST00000423214 MORC3Q14149 939 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 ARID5BQ14865 1188 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 CCDC157Q569K6 752 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 ZC3H12AQ5D1E8 599 aaKnown RBP16.69■□□□□ 0.26
COL18A1-205ENST00000423214 SYPL2Q5VXT5 272 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 DBX2Q6ZNG2 339 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 ENOSF1Q7L5Y1 443 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 OR2T34Q8NGX1 318 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 STK32AQ8WU08 396 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 SLC6A18Q96N87 628 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 MED15Q96RN5 788 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 SLC4A5Q9BY07 1137 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 THAP9Q9H5L6 903 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 TOR4AQ9NXH8 423 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 FTSJ1Q9UET6 329 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 SLC12A6Q9UHW9 1150 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 XPO7Q9UIA9 1087 aaKnown RBP16.69■□□□□ 0.26
COL18A1-205ENST00000423214 CNTN6Q9UQ52 1028 aa16.69■□□□□ 0.26
COL18A1-205ENST00000423214 BAHCC1Q9P281 2608 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 TDRD6O60522 2096 aaKnown RBP16.68■□□□□ 0.26
COL18A1-205ENST00000423214 KCNK3O14649 394 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 VILLO15195 856 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 PAPSS1O43252 624 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-205ENST00000423214 TNFSF14O43557 240 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 PCDHGA12O60330 932 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 ABCB4P21439 1286 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 BMP6P22004 513 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 SLC8A1P32418 973 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 STK19P49842 368 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-205ENST00000423214 YWHAZP63104 245 aaKnown RBP16.68■□□□□ 0.26
COL18A1-205ENST00000423214 PDCLQ13371 301 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 RABGAP1LQ5R372 815 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 C9orf64Q5T6V5 341 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 TTC39BQ5VTQ0 682 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-205ENST00000423214 SND1Q7KZF4 910 aaKnown RBP eCLIP16.68■□□□□ 0.264e-14■□□□□ 9.2
COL18A1-205ENST00000423214 TMPRSS7Q7RTY8 843 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 APCDD1Q8J025 514 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 MDM1Q8TC05 714 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 RNF34Q969K3 372 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 RPL10LQ96L21 214 aaKnown RBP16.68■□□□□ 0.26
COL18A1-205ENST00000423214 FAM81BQ96LP2 452 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 SRRTQ9BXP5 876 aaKnown RBP16.68■□□□□ 0.26
COL18A1-205ENST00000423214 NEUROG2Q9H2A3 272 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 CHMP5Q9NZZ3 219 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 ADAMTS1Q9UHI8 967 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 ITPR1Q14643 2758 aa16.68■□□□□ 0.26
COL18A1-205ENST00000423214 NBEAQ8NFP9 2946 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 SYNJ2BP-COX16A0A087WUM0 186 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 A0A1B0GVM2 712 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 TCAF2A6NFQ2 919 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 TAF4O00268 1085 aa16.67■□□□□ 0.26
COL18A1-205ENST00000423214 SLC2A3P11169 496 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms