RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 TPM3P06753 285 aa27.22■■□□□ 1.95
CDK9-202ENST00000421939 RFC1P35251 1148 aaPredicted RBP27.22■■□□□ 1.95
CDK9-202ENST00000421939 SPEM2Q0P670 501 aa27.22■■□□□ 1.95
CDK9-202ENST00000421939 PLEKHG6Q3KR16 790 aa27.22■■□□□ 1.95
CDK9-202ENST00000421939 C5orf22Q49AR2 442 aa27.22■■□□□ 1.95
CDK9-202ENST00000421939 CXorf57Q6NSI4 855 aaKnown RBP27.22■■□□□ 1.95
CDK9-202ENST00000421939 HAPLN3Q96S86 360 aa27.22■■□□□ 1.95
CDK9-202ENST00000421939 XPO4Q9C0E2 1151 aaKnown RBP27.22■■□□□ 1.95
CDK9-202ENST00000421939 USP18Q9UMW8 372 aa27.22■■□□□ 1.95
CDK9-202ENST00000421939 ZNF217O75362 1048 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 CLDN11O75508 207 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 GPD1P21695 349 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 TGM1P22735 817 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 OXCT1P55809 520 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 SLC12A1Q13621 1099 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 WDR59Q6PJI9 974 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 STRADAQ7RTN6 431 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 ZNF683Q8IZ20 524 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 FRMD1Q8N878 549 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 ZNF366Q8N895 744 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 C1orf74Q96LT6 269 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 MKRN2Q9H000 416 aaKnown RBP27.21■■□□□ 1.95
CDK9-202ENST00000421939 MBD1Q9UIS9 605 aaPredicted RBP27.21■■□□□ 1.95
CDK9-202ENST00000421939 PCDHGA5Q9Y5G8 931 aa27.21■■□□□ 1.95
CDK9-202ENST00000421939 TMCO5BA8MYB1 307 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 RRM1P23921 792 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 CDH4P55283 916 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 ST8SIA6P61647 398 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 CAMK2GQ13555 558 aaPredicted RBP27.2■■□□□ 1.94
CDK9-202ENST00000421939 RAB6CQ53S08 254 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 SH3PXD2AQ5TCZ1 1133 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 LRRC31Q6UY01 552 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 APCDD1Q8J025 514 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 FAM172AQ8WUF8 416 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 CENPIQ92674 756 aaPredicted RBP27.2■■□□□ 1.94
CDK9-202ENST00000421939 VCPIP1Q96JH7 1222 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 MCEEQ96PE7 176 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 RAB6CQ9H0N0 254 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 ARRDC1-AS1Q9H2J1 176 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 PRDM16Q9HAZ2 1276 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 ABCA7Q8IZY2 2146 aa27.2■■□□□ 1.94
CDK9-202ENST00000421939 ITIH6Q6UXX5 1313 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.19■■□□□ 1.94
CDK9-202ENST00000421939 ANKRD62A6NC57 917 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 DDX3XO00571 662 aaKnown RBP eCLIP27.19■■□□□ 1.942e-8■■■□□ 14.7
CDK9-202ENST00000421939 MAP3K13O43283 966 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 SKILP12757 684 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 MZF1P28698 734 aaPredicted RBP27.19■■□□□ 1.94
CDK9-202ENST00000421939 COPAP53621 1224 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 ZBED6P86452 979 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 ZNF177Q13360 481 aaPredicted RBP27.19■■□□□ 1.94
CDK9-202ENST00000421939 PPP1R15BQ5SWA1 713 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 TMPRSS6Q8IU80 811 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 RNF214Q8ND24 703 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 OR2T3Q8NH03 318 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 SYN2Q92777 582 aaPredicted RBP27.19■■□□□ 1.94
CDK9-202ENST00000421939 MYO19Q96H55 970 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 MRGPRX3Q96LB0 322 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 SEMA4GQ9NTN9 838 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 CAPN11Q9UMQ6 739 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 CYP8B1Q9UNU6 501 aa27.19■■□□□ 1.94
CDK9-202ENST00000421939 IGHV1OR15-9A0A0B4J2B8 117 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 E9PAM4 449 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 CNTN5O94779 1100 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 CTSOP43234 321 aaPredicted RBP27.18■■□□□ 1.94
CDK9-202ENST00000421939 HDAC4P56524 1084 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 ECT2LQ008S8 904 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 ARL13BQ3SXY8 428 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 ALFQ53S48 1182 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 TDRD12Q587J7 1177 aaKnown RBP27.18■■□□□ 1.94
CDK9-202ENST00000421939 RNF219Q5W0B1 726 aaPredicted RBP27.18■■□□□ 1.94
CDK9-202ENST00000421939 SLC36A4Q6YBV0 504 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 LPCAT2Q7L5N7 544 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 KDM1BQ8NB78 822 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 SIPA1Q96FS4 1042 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 FBRSQ9HAH7 460 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 CD93Q9NPY3 652 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 ERVW-1Q9UQF0 538 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 THADAQ6YHU6 1953 aa27.18■■□□□ 1.94
CDK9-202ENST00000421939 IGLV3-10A0A075B6K4 115 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 DRGXA6NNA5 263 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 CBFA2T2O43439 604 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 GYPCP04921 128 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 SRPRAP08240 638 aaKnown RBP27.17■■□□□ 1.94
CDK9-202ENST00000421939 GZMAP12544 262 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 MPLP40238 635 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 ZNF143P52747 638 aaPredicted RBP27.17■■□□□ 1.94
CDK9-202ENST00000421939 PLK1P53350 603 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 RPL7AP62424 266 aaKnown RBP27.17■■□□□ 1.94
CDK9-202ENST00000421939 CSRP2Q16527 193 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 HGSNATQ68CP4 663 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 DCUN1D2Q6PH85 259 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 METTL3Q86U44 580 aaKnown RBP27.17■■□□□ 1.94
CDK9-202ENST00000421939 CACUL1Q86Y37 369 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 OR52K2Q8NGK3 314 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 CPLX3Q8WVH0 158 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 PRCCQ92733 491 aaPredicted RBP27.17■■□□□ 1.94
CDK9-202ENST00000421939 PPP1R9BQ96SB3 815 aa27.17■■□□□ 1.94
CDK9-202ENST00000421939 USP36Q9P275 1121 aaKnown RBP27.17■■□□□ 1.94
CDK9-202ENST00000421939 SUN2Q9UH99 717 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms